RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 SUCLA2Q9P2R7 463 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-210ENST00000527027 DBR1Q9UK59 544 aaKnown RBP18.11■□□□□ 0.49
PTPRU-210ENST00000527027 MYO10Q9HD67 2058 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 CYP3A7-CYP3A51PA0A087WV96 503 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 TMEM150BA6NC51 233 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 DDX11L8A8MPP1 907 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 MAFO75444 373 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-210ENST00000527027 OFD1O75665 1012 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 CENPBP07199 599 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-210ENST00000527027 ASGR2P07307 311 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 CYP3A7P24462 503 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 NLRP5P59047 1200 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 B3GNT9Q6UX72 402 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 TMEM105Q8N8V8 129 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 SH2D3AQ9BRG2 576 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 SMOC2Q9H3U7 446 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 FAM105AQ9NUU6 356 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 PIN4Q9Y237 131 aaKnown RBP18.1■□□□□ 0.49
PTPRU-210ENST00000527027 SNX14Q9Y5W7 946 aa18.1■□□□□ 0.49
PTPRU-210ENST00000527027 RPS6KB1P23443 525 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 HSPA4P34932 840 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 RAB27AP51159 221 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 RNASELQ05823 741 aaKnown RBP18.09■□□□□ 0.49
PTPRU-210ENST00000527027 ASTLQ6HA08 431 aaPredicted RBP18.09■□□□□ 0.49
PTPRU-210ENST00000527027 CATSPER4Q7RTX7 472 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 CABP7Q86V35 215 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 PPFIBP1Q86W92 1011 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 RHPN2Q8IUC4 686 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 BCL7CQ8WUZ0 217 aaPredicted RBP18.09■□□□□ 0.49
PTPRU-210ENST00000527027 PGBD4Q96DM1 585 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 CYP26B1Q9NR63 512 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 INPP5FQ9Y2H2 1132 aa18.09■□□□□ 0.49
PTPRU-210ENST00000527027 RIF1Q5UIP0 2472 aaKnown RBP18.08■□□□□ 0.49
PTPRU-210ENST00000527027 WDR87Q6ZQQ6 2873 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 MEIS3P2A8K0S8 358 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 PDIA3P30101 505 aaKnown RBP18.08■□□□□ 0.48
PTPRU-210ENST00000527027 SLC11A1P49279 550 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 CLCN5P51795 746 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 EVCP57679 992 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 TMC5Q6UXY8 1006 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 GPR149Q86SP6 731 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 JPH2Q9BR39 696 aaPredicted RBP18.08■□□□□ 0.48
PTPRU-210ENST00000527027 GBP3Q9H0R5 595 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 NCOA5Q9HCD5 579 aaKnown RBP18.08■□□□□ 0.48
PTPRU-210ENST00000527027 DNAJB4Q9UDY4 337 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 STK39Q9UEW8 545 aa18.08■□□□□ 0.48
PTPRU-210ENST00000527027 VPS13AQ96RL7 3174 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 MYO15AQ9UKN7 3530 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 TDP2O95551 362 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 PSMA5P28066 241 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 CCT2P78371 535 aaKnown RBP18.07■□□□□ 0.48
PTPRU-210ENST00000527027 PTPN14Q15678 1187 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 ANO5Q75V66 913 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 CENPQQ7L2Z9 268 aaPredicted RBP18.07■□□□□ 0.48
PTPRU-210ENST00000527027 ZNF280BQ86YH2 543 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 KSR1Q8IVT5 923 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 ACSF2Q96CM8 615 aaPredicted RBP18.07■□□□□ 0.48
PTPRU-210ENST00000527027 NLRP4Q96MN2 994 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 VN1R3Q9BXE9 311 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 MFSD1Q9H3U5 465 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 PCDHA4Q9UN74 947 aa18.07■□□□□ 0.48
PTPRU-210ENST00000527027 ALDH2P05091 517 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 KLRC2P26717 231 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 NBL1P41271 181 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 PSMC5P62195 406 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 OTOP3Q7RTS5 596 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 ASCL5Q7RTU5 278 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 MRPL10Q7Z7H8 261 aaKnown RBP18.06■□□□□ 0.48
PTPRU-210ENST00000527027 TRIM22Q8IYM9 498 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 ETNPPLQ8TBG4 499 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 URGCPQ8TCY9 931 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 MBOAT7Q96N66 472 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 KLHL5Q96PQ7 755 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 EMILIN2Q9BXX0 1053 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 SFXN1Q9H9B4 322 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 IFT122Q9HBG6 1241 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 PCDHB2Q9Y5E7 798 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 SPTBN4Q9H254 2564 aa18.06■□□□□ 0.48
PTPRU-210ENST00000527027 M0R2N6 131 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 B4GALT3O60512 393 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 DDHD2O94830 711 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 SSRP1Q08945 709 aaKnown RBP18.05■□□□□ 0.48
PTPRU-210ENST00000527027 MOXD1Q6UVY6 613 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 AGMOQ6ZNB7 445 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 BLIDQ8IZY5 108 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 FEZF2Q8TBJ5 459 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 AGPAT5Q9NUQ2 364 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 KANSL3Q9P2N6 904 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 COL4A3BPQ9Y5P4 624 aa18.05■□□□□ 0.48
PTPRU-210ENST00000527027 WDR81Q562E7 1941 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 LILRB3O75022 631 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 CNPP09543 421 aaKnown RBP18.04■□□□□ 0.48
PTPRU-210ENST00000527027 CLCN4P51793 760 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 TDGQ13569 410 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 PLA2G4FQ68DD2 849 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 CCDC149Q6ZUS6 474 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 EXOC8Q8IYI6 725 aa18.04■□□□□ 0.48
PTPRU-210ENST00000527027 PRPF31Q8WWY3 499 aaKnown RBP18.04■□□□□ 0.48
PTPRU-210ENST00000527027 SLC7A3Q8WY07 619 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms