RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 MXD4Q14582 209 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 DTHD1Q6ZMT9 781 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 ASAP3Q8TDY4 903 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 MRPL38Q96DV4 380 aaKnown RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 C11orf84Q9BUA3 381 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 CHST12Q9NRB3 414 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 LMCD1Q9NZU5 365 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 RWDD3Q9Y3V2 267 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 FNDC1Q4ZHG4 1894 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 MEIS3P2A8K0S8 358 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 ASAP2O43150 1006 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 RB1P06400 928 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 ATF7P17544 494 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 GLRA2P23416 452 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 CAPSQ13938 189 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 ZRSR1Q15695 479 aaKnown RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 FOXD4L5Q5VV16 416 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 LRRC55Q6ZSA7 311 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 ABI1Q8IZP0 508 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 SNX29Q8TEQ0 813 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 FOXD4L4Q8WXT5 416 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 LPPQ93052 612 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 CASD1Q96PB1 797 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 POLR3FQ9H1D9 316 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 DBR1Q9UK59 544 aaKnown RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 PLAGL2Q9UPG8 496 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 C5orf42Q9H799 3197 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 LAD1O00515 517 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 ITGB1P05556 798 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 DNAJB1P25685 340 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 HOXA11P31270 313 aaPredicted RBP12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 ARL2P36404 184 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 PBX3P40426 434 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 PHKA2P46019 1235 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 PTPROQ16827 1216 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 PADI6Q6TGC4 694 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 FAM43BQ6ZT52 329 aaPredicted RBP12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 SRGAP1Q7Z6B7 1085 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 HELQQ8TDG4 1101 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 COL25A1Q9BXS0 654 aaPredicted RBP12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 RAB34Q9BZG1 259 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 RNF19AQ9NV58 838 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 RALGAPA2Q2PPJ7 1873 aa12.35□□□□□ -0.43
SNRNP35-203ENST00000526639 ARHGEF35A5YM69 484 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 E9PMD0 336 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 ERLIN2O94905 339 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 PRPHP41219 470 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 PTENP60484 403 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 ZNF598Q86UK7 904 aaKnown RBP12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 ATXN2LQ8WWM7 1075 aaKnown RBP12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 HLA-CQ95604 372 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 CPB2Q96IY4 423 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 PLVAPQ9BX97 442 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 TMEM117Q9H0C3 514 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 CWH43Q9H720 699 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 FAM105AQ9NUU6 356 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 CUL9Q8IWT3 2517 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 KIAA1671Q9BY89 1806 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 LRRIQ4A6NIV6 560 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 EOMESO95936 686 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 F13A1P00488 732 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 CAMK1Q14012 370 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 TFDP1Q14186 410 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 KRT79Q5XKE5 535 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 P2RX5Q93086 422 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 ASB2Q96Q27 587 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 PLIN2Q99541 437 aa12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 MMTAG2Q9BU76 263 aaKnown RBP12.34□□□□□ -0.43
SNRNP35-203ENST00000526639 BRWD1Q9NSI6 2320 aa12.33□□□□□ -0.43
SNRNP35-203ENST00000526639 HOXA2O43364 376 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 KCNQ1P51787 676 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 MBTD1Q05BQ5 628 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 NFKBIBQ15653 356 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 TCEAL5Q5H9L2 206 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 FAM173BQ6P4H8 233 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 EP400NLQ6ZTU2 488 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 CDR2LQ86X02 465 aaPredicted RBP12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 MCPH1Q8NEM0 835 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 SPPL3Q8TCT6 385 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 POF1BQ8WVV4 589 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 TRAIPQ9BWF2 469 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 ZMYND15Q9H091 742 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 INPP5FQ9Y2H2 1132 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 PCDHB2Q9Y5E7 798 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
SNRNP35-203ENST00000526639 B4GALT5O43286 388 aa12.32□□□□□ -0.44
SNRNP35-203ENST00000526639 TSPAN1O60635 241 aa12.32□□□□□ -0.44
SNRNP35-203ENST00000526639 CYP11B2P19099 503 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms