RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 AUTS2Q8WXX7 1259 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 KCNB2Q92953 911 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 RIPOR3Q96MK2 946 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 FDXACB1Q9BRP7 624 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-204ENST00000526468 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 GBP3Q9H0R5 595 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 ZBP1Q9H171 429 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 DZANK1Q9NVP4 752 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 SORCS3Q9UPU3 1222 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 CPLX1O14810 134 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 PSMD10O75832 226 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 PSMA5P28066 241 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 CLCN1P35523 988 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 MTHFRP42898 656 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 DNM2P50570 870 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 RAB27AP51159 221 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 USP11P51784 963 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 TARBP2Q15633 366 aaKnown RBP13.16□□□□□ -0.3
CAPN1-204ENST00000526468 Q4G0T1 1027 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 ZNF410Q86VK4 478 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 MRPL43Q8N983 215 aaKnown RBP13.16□□□□□ -0.3
CAPN1-204ENST00000526468 ADAM7Q9H2U9 754 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
CAPN1-204ENST00000526468 PCDHA4Q9UN74 947 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
CAPN1-204ENST00000526468 PATJQ8NI35 1801 aa13.16□□□□□ -0.3
CAPN1-204ENST00000526468 REC8O95072 547 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 BRD1O95696 1058 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 SKIP12755 728 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 EPCAMP16422 314 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 PDIA3P30101 505 aaKnown RBP13.15□□□□□ -0.3
CAPN1-204ENST00000526468 SSRP1Q08945 709 aaKnown RBP13.15□□□□□ -0.3
CAPN1-204ENST00000526468 KIAA1841Q6NSI8 718 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 C12orf76Q8N812 135 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-204ENST00000526468 BCL7CQ8WUZ0 217 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-204ENST00000526468 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-204ENST00000526468 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 SMOC2Q9H3U7 446 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 CHST12Q9NRB3 414 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-204ENST00000526468 FAM105AQ9NUU6 356 aa13.15□□□□□ -0.3
CAPN1-204ENST00000526468 SUCLA2Q9P2R7 463 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-204ENST00000526468 DDX25Q9UHL0 483 aaKnown RBP13.15□□□□□ -0.3
CAPN1-204ENST00000526468 CARNS1A5YM72 827 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 MEIS3P2A8K0S8 358 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 SLC37A4O43826 429 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 EDIL3O43854 480 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 GFRA3O60609 400 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 DEXIO95424 95 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 CXCL14O95715 111 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 SSBP05455 408 aaKnown RBP eCLIP13.14□□□□□ -0.31
CAPN1-204ENST00000526468 ASGR2P07307 311 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 AVPR2P30518 371 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 CDC42EP1Q00587 391 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 NONOQ15233 471 aaKnown RBP eCLIP13.14□□□□□ -0.31
CAPN1-204ENST00000526468 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 CABP7Q86V35 215 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 KSR1Q8IVT5 923 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 BLIDQ8IZY5 108 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 FBXL16Q8N461 479 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 ETNPPLQ8TBG4 499 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 URGCPQ8TCY9 931 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 NIFKQ9BYG3 293 aaKnown RBP13.14□□□□□ -0.31
CAPN1-204ENST00000526468 INO80BQ9C086 356 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-204ENST00000526468 SFXN1Q9H9B4 322 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 DNAJB4Q9UDY4 337 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 VPS13AQ96RL7 3174 aa13.14□□□□□ -0.31
CAPN1-204ENST00000526468 EP300Q09472 2414 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-204ENST00000526468 IGKV6-21A0A0C4DH24 114 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 GOLGA6L3A6NEY3 463 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 TPM2P07951 284 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 CTSAP10619 480 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 SLC11A1P49279 550 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 POLGP54098 1239 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-204ENST00000526468 PSMC5P62195 406 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 STK3Q13188 491 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-204ENST00000526468 GIT2Q14161 759 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 PTPN14Q15678 1187 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 INF2Q27J81 1249 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 MOXD1Q6UVY6 613 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 DDX53Q86TM3 631 aaKnown RBP13.13□□□□□ -0.31
CAPN1-204ENST00000526468 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 SLC7A3Q8WY07 619 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 AIFM3Q96NN9 605 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 CEP89Q96ST8 783 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 JPH2Q9BR39 696 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-204ENST00000526468 IRF2BPLQ9H1B7 796 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 MFSD1Q9H3U5 465 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 COL4A3BPQ9Y5P4 624 aa13.13□□□□□ -0.31
CAPN1-204ENST00000526468 CACNA1IQ9P0X4 2223 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms