RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NWD2Q9ULI1 1742 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 A0A1B0GTL3 188 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 APAF1O14727 1248 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 ADRB1P08588 477 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 IL2RBP14784 551 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 SDSP20132 328 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 PRKAR2BP31323 418 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 KCNC1P48547 511 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 SLURP1P55000 103 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 ARHGAP44Q17R89 818 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 C21orf62-AS1Q17RA5 79 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 TKFCQ3LXA3 575 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 AMOTQ4VCS5 1084 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 PLEKHO1Q53GL0 409 aaPredicted RBP5.74□□□□□ -1.49
USP48-211ENST00000526044 CD276Q5ZPR3 534 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 ZNF772Q68DY9 489 aaPredicted RBP5.74□□□□□ -1.49
USP48-211ENST00000526044 UBE2R2Q712K3 238 aaPredicted RBP5.74□□□□□ -1.49
USP48-211ENST00000526044 TCP11L2Q8N4U5 519 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 PHACTR3Q96KR7 559 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 PLEKHF1Q96S99 279 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 FEZ1Q99689 392 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 TMPRSS5Q9H3S3 457 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 DLL4Q9NR61 685 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 RBPJLQ9UBG7 517 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 COL3A1P02461 1466 aaPredicted RBP5.74□□□□□ -1.49
USP48-211ENST00000526044 COL5A2P05997 1499 aaPredicted RBP5.74□□□□□ -1.49
USP48-211ENST00000526044 SLIT2O94813 1529 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 CRB1P82279 1406 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 SPATA31A1Q5TZJ5 1347 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 SPATA31A5Q5VU36 1347 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 SPATA31A7Q8IWB4 1347 aa5.74□□□□□ -1.49
USP48-211ENST00000526044 PLCH1Q4KWH8 1693 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 FAM208AQ9UK61 1670 aaKnown RBP5.73□□□□□ -1.49
USP48-211ENST00000526044 BCL9LQ86UU0 1499 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 SLC12A8A0AV02 714 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 EXOC5O00471 708 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 ENPP3O14638 875 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 KCNK3O14649 394 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 PFKPQ01813 784 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 DBPQ10586 325 aaPredicted RBP5.73□□□□□ -1.49
USP48-211ENST00000526044 SKOR2Q2VWA4 1001 aaPredicted RBP5.73□□□□□ -1.49
USP48-211ENST00000526044 PRR31Q5SQ13 230 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 GIMAP6Q6P9H5 292 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 GGNQ86UU5 652 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 DTX3Q8N9I9 347 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 NINJ1Q92982 152 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 WNK4Q96J92 1243 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 ZSWIM3Q96MP5 696 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 CROTQ9UKG9 612 aa5.73□□□□□ -1.49
USP48-211ENST00000526044 TMA7Q9Y2S6 64 aaKnown RBP5.73□□□□□ -1.49
USP48-211ENST00000526044 KDRP35968 1356 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 RGPD1P0DJD0 1748 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 ZNF839A8K0R7 811 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 M0R2C6 588 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 SCDO00767 359 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 GLRX3O76003 335 aaKnown RBP5.72□□□□□ -1.49
USP48-211ENST00000526044 C4BPAP04003 597 aaKnown RBP5.72□□□□□ -1.49
USP48-211ENST00000526044 JMJD7P0C870 316 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 TMPOP42166 694 aaKnown RBP5.72□□□□□ -1.49
USP48-211ENST00000526044 RIPK4P57078 832 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 HERVK_113P62684 666 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 ZNF460Q14592 562 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 SKIDA1Q1XH10 827 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 MTHFSDQ2M296 383 aaKnown RBP5.72□□□□□ -1.49
USP48-211ENST00000526044 CFAP100Q494V2 611 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 PRAMEF18Q5VWM3 479 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 OTOP1Q7RTM1 612 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 KIAA0907Q7Z7F0 614 aaPredicted RBP5.72□□□□□ -1.49
USP48-211ENST00000526044 NOSTRINQ8IVI9 506 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 NIM1KQ8IY84 436 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 NGEFQ8N5V2 710 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 ZCRB1Q8TBF4 217 aaKnown RBP5.72□□□□□ -1.49
USP48-211ENST00000526044 IGDCC4Q8TDY8 1250 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 SPATA25Q9BR10 227 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 CABP5Q9NP86 173 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 KCNH7Q9NS40 1196 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 ARHGAP20Q9P2F6 1191 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 PLAAQ9Y263 795 aa5.72□□□□□ -1.49
USP48-211ENST00000526044 NRAPQ86VF7 1730 aa5.71□□□□□ -1.49
USP48-211ENST00000526044 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.71□□□□□ -1.5
USP48-211ENST00000526044 PRAMEF25A6NGN4 478 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 DDX3XO00571 662 aaKnown RBP eCLIP5.71□□□□□ -1.5
USP48-211ENST00000526044 HIP1RO75146 1068 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 MECP2P51608 486 aaKnown RBP5.71□□□□□ -1.5
USP48-211ENST00000526044 RBM6P78332 1123 aaKnown RBP5.71□□□□□ -1.5
USP48-211ENST00000526044 RTP5Q14D33 572 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 SEC23AQ15436 765 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 DDB1Q16531 1140 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 PLEKHG4Q58EX7 1191 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 PIK3R6Q5UE93 754 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 CPZQ66K79 652 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 CDCA2Q69YH5 1023 aaPredicted RBP5.71□□□□□ -1.5
USP48-211ENST00000526044 PKN3Q6P5Z2 889 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 IFNL2Q8IZJ0 200 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 CHST14Q8NCH0 376 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 ADAMTS17Q8TE56 1095 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 RTF1Q92541 710 aaKnown RBP5.71□□□□□ -1.5
USP48-211ENST00000526044 YTHDC1Q96MU7 727 aaKnown RBP5.71□□□□□ -1.5
USP48-211ENST00000526044 BOCQ9BWV1 1114 aa5.71□□□□□ -1.5
USP48-211ENST00000526044 XYLT2Q9H1B5 865 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms