RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 MYO10Q9HD67 2058 aa13.23□□□□□ -0.29
CLNS1A-202ENST00000525064 PLXNA3P51805 1871 aa13.23□□□□□ -0.29
CLNS1A-202ENST00000525064 DENND4AQ7Z401 1863 aa13.23□□□□□ -0.29
CLNS1A-202ENST00000525064 BTBD18B2RXH4 712 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 TBX3O15119 743 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 ALADP13716 330 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 YWHABP31946 246 aaKnown RBP13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 POLGP54098 1239 aaPredicted RBP13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 BCAR1P56945 870 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 SYCE2Q6PIF2 218 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 C4orf19Q8IY42 314 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 SUSD6Q92537 303 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 POP1Q99575 1024 aaKnown RBP13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 CDCA3Q99618 268 aaPredicted RBP13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 TRAIPQ9BWF2 469 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 CHST12Q9NRB3 414 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 AGPAT5Q9NUQ2 364 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 SPG21Q9NZD8 308 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 INPP5FQ9Y2H2 1132 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 HCN4Q9Y3Q4 1203 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 KMT2EQ8IZD2 1858 aa13.22□□□□□ -0.29
CLNS1A-202ENST00000525064 LOC730098B7Z3J9 87 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 MARCH6O60337 910 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 ZC3H11AO75152 810 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 SRGAP2CP0DJJ0 459 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 PPM1AP35813 382 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 TECP42680 631 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 AFF1P51825 1210 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 NEK4P51957 841 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 LAMTOR4Q0VGL1 99 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 EMC2Q15006 297 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 HERC4Q5GLZ8 1057 aaPredicted RBP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 UBXN11Q5T124 520 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 ANKRD54Q6NXT1 300 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 TMC7Q7Z402 723 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 DIS3L2Q8IYB7 885 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 PSPC1Q8WXF1 523 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 AUTS2Q8WXX7 1259 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 SLC7A3Q8WY07 619 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 WASF1Q92558 559 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 EIF2AK1Q9BQI3 630 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 JPH2Q9BR39 696 aaPredicted RBP13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 S1PR5Q9H228 398 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 DNAJB4Q9UDY4 337 aa13.21□□□□□ -0.29
CLNS1A-202ENST00000525064 MUC6Q6W4X9 2439 aa13.21□□□□□ -0.3
CLNS1A-202ENST00000525064 A0A087WWV3 80 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 C2orf71A6NGG8 1288 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 DKC1O60832 514 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 OFD1O75665 1012 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 SLITRK3O94933 977 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 RFC5P40937 340 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 CDC42EP1Q00587 391 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 CALCRLQ16602 461 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 XKR9Q5GH70 373 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 TMEM184AQ6ZMB5 413 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 FEZF2Q8TBJ5 459 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 NAP1L4Q99733 375 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 VN1R3Q9BXE9 311 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 MRPL9Q9BYD2 267 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 INO80BQ9C086 356 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 PUF60Q9UHX1 559 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-202ENST00000525064 CLASP2O75122 1294 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 BAG4O95429 457 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 GALTP07902 379 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 SP100P23497 879 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 HOXA11P31270 313 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 CA8P35219 290 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 SLC11A1P49279 550 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 KRT17Q04695 432 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 CBX2Q14781 532 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 FERMT3Q86UX7 667 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 ZNF280BQ86YH2 543 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 TPH2Q8IWU9 490 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 SLFN12Q8IYM2 578 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 RPGRIP1Q96KN7 1286 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 MTRQ99707 1265 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 ZBP1Q9H171 429 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 ZSWIM4Q9H7M6 989 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 NGRNQ9NPE2 291 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 PPME1Q9Y570 386 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 HCFC2Q9Y5Z7 792 aa13.19□□□□□ -0.3
CLNS1A-202ENST00000525064 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms