RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 RNF149Q8NC42 400 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 ERMNQ8TAM6 284 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 FAM105AQ9NUU6 356 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 DBR1Q9UK59 544 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 UNC80Q8N2C7 3258 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 NCK2O43639 380 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 FGF18O76093 207 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 RAB27AP51159 221 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 UBE3AQ05086 875 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 MXD4Q14582 209 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 IFNLR1Q8IU57 520 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 THNSL1Q8IYQ7 743 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 LPPQ93052 612 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 ZNF558Q96NG5 402 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 PCDHB6Q9Y5E3 794 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 TDRD15B5MCY1 1934 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 USO1O60763 962 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 ZNF623O75123 536 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 GLRA2P23416 452 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 RPA1P27694 616 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 GJB2P29033 226 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 GTF2F1P35269 517 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 PTENP60484 403 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 CAPSQ13938 189 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 TFDP1Q14186 410 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 CTC1Q2NKJ3 1217 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 UBXN11Q5T124 520 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 POTEGQ6S5H5 508 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 ADGRD2Q7Z7M1 963 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 NACC1Q96RE7 527 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 POLR3FQ9H1D9 316 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 CLDND1Q9NY35 253 aa12.42□□□□□ -0.42
TRAPPC4-204ENST00000524797 FSCN2O14926 492 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 HOXA11P31270 313 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 LTBRP36941 435 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 PLCB3Q01970 1234 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 POU5F1BQ06416 359 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 PTGDRQ13258 359 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 KCNT2Q6UVM3 1135 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 EP400NLQ6ZTU2 488 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 MRPL10Q7Z7H8 261 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 IGFLR1Q9H665 355 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 LZTS1Q9Y250 596 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 PCDHB2Q9Y5E7 798 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 PCDHGC5Q9Y5F6 944 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 MEIS3P2A8K0S8 358 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 H3BQ06 376 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 LINC01565O15544 149 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 TSPAN1O60635 241 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 MUTP22033 750 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 MBTD1Q05BQ5 628 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 PUS10Q3MIT2 529 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 LONRF3Q496Y0 759 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 MCTP1Q6DN14 999 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 PTCRAQ6ISU1 281 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 RSPH1Q8WYR4 309 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 MRPS27Q92552 414 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 PPP2R3CQ969Q6 453 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 PGBD4Q96DM1 585 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 TLR9Q9NR96 1032 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 LRWD1Q9UFC0 647 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 SMC3Q9UQE7 1217 aa12.41□□□□□ -0.42
TRAPPC4-204ENST00000524797 NCOR1O75376 2440 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 GRXCR2A6NFK2 248 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 OFD1O75665 1012 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 ERLIN2O94905 339 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 IL9P15248 144 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 PPM1AP35813 382 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 CCT6AP40227 531 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 PBX3P40426 434 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 ERVFC1P60507 584 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 ADAM15Q13444 863 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 PCBP1Q15365 356 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 ECM1Q16610 540 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 HAUS3Q68CZ6 603 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 AGMOQ6ZNB7 445 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 SLC39A11Q8N1S5 342 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 MCPH1Q8NEM0 835 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 GPRC5CQ9NQ84 441 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 SPG21Q9NZD8 308 aa12.4□□□□□ -0.42
TRAPPC4-204ENST00000524797 ARHGEF35A5YM69 484 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 H3BQV1 296 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 INO80B-WBP1J3KQ70 363 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 TBX10O75333 385 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 AXLP30530 894 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 NRIP1P48552 1158 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 DLX2Q07687 328 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 PDIA5Q14554 519 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 AMHR2Q16671 573 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 PDE12Q6L8Q7 609 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 PADI6Q6TGC4 694 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 GLB1LQ6UWU2 654 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 MAEAQ7L5Y9 396 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 EFHBQ8N7U6 833 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms