RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 PCDHB12Q9Y5F1 795 aa12.21□□□□□ -0.45
CTSB-207ENST00000524654 TSPAN1O60635 241 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 USO1O60763 962 aaKnown RBP12.2□□□□□ -0.46
CTSB-207ENST00000524654 FGF18O76093 207 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 LAG3P18627 525 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 CCT6AP40227 531 aaKnown RBP12.2□□□□□ -0.46
CTSB-207ENST00000524654 UBE3AQ05086 875 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 MBTD1Q05BQ5 628 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 TFDP1Q14186 410 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 UBXN11Q5T124 520 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 LARP1BQ659C4 914 aaKnown RBP12.2□□□□□ -0.46
CTSB-207ENST00000524654 MRPL10Q7Z7H8 261 aaKnown RBP12.2□□□□□ -0.46
CTSB-207ENST00000524654 ABI1Q8IZP0 508 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 MCPH1Q8NEM0 835 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 ADAMTS19Q8TE59 1207 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 POF1BQ8WVV4 589 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 RSPH1Q8WYR4 309 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 PABPC5Q96DU9 382 aaKnown RBP12.2□□□□□ -0.46
CTSB-207ENST00000524654 POLR3FQ9H1D9 316 aaPredicted RBP12.2□□□□□ -0.46
CTSB-207ENST00000524654 GPRC5CQ9NQ84 441 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 PCDHB2Q9Y5E7 798 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 STK24Q9Y6E0 443 aa12.2□□□□□ -0.46
CTSB-207ENST00000524654 PRRC2BQ5JSZ5 2229 aaKnown RBP12.2□□□□□ -0.46
CTSB-207ENST00000524654 MEIS3P2A8K0S8 358 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 NCK2O43639 380 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 CYP11B2P19099 503 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 AXLP30530 894 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 IRS1P35568 1242 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 ATP2C1P98194 919 aaPredicted RBP12.19□□□□□ -0.46
CTSB-207ENST00000524654 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 HYAL1Q12794 435 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 AMHR2Q16671 573 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 CTC1Q2NKJ3 1217 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 LEXMQ3ZCV2 418 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 SPOUT1Q5T280 376 aaKnown RBP12.19□□□□□ -0.46
CTSB-207ENST00000524654 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 KCNT2Q6UVM3 1135 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 DTHD1Q6ZMT9 781 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 LPPQ93052 612 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 MRPL9Q9BYD2 267 aaKnown RBP12.19□□□□□ -0.46
CTSB-207ENST00000524654 RAB34Q9BZG1 259 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 WDR81Q562E7 1941 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 RALGAPA2Q2PPJ7 1873 aa12.19□□□□□ -0.46
CTSB-207ENST00000524654 EVPLQ92817 2033 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 ARHGEF35A5YM69 484 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 PP2D1A8MPX8 630 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 INO80B-WBP1J3KQ70 363 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 OFD1O75665 1012 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 ERLIN2O94905 339 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 KCNA5P22460 613 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 LTBRP36941 435 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 PBX3P40426 434 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 LONRF3Q496Y0 759 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 CDCA2Q69YH5 1023 aaPredicted RBP12.18□□□□□ -0.46
CTSB-207ENST00000524654 GLB1LQ6UWU2 654 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 AGMOQ6ZNB7 445 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 MAEAQ7L5Y9 396 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 THNSL1Q8IYQ7 743 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 SMG8Q8ND04 991 aaKnown RBP12.18□□□□□ -0.46
CTSB-207ENST00000524654 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.18□□□□□ -0.46
CTSB-207ENST00000524654 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 PGBD4Q96DM1 585 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 ZNF558Q96NG5 402 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 UHRF1Q96T88 793 aaPredicted RBP12.18□□□□□ -0.46
CTSB-207ENST00000524654 MMTAG2Q9BU76 263 aaKnown RBP12.18□□□□□ -0.46
CTSB-207ENST00000524654 BHMT2Q9H2M3 363 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 DDX19AQ9NUU7 478 aaKnown RBP12.18□□□□□ -0.46
CTSB-207ENST00000524654 KIAA1024Q9UPX6 916 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 LZTS1Q9Y250 596 aa12.18□□□□□ -0.46
CTSB-207ENST00000524654 MUC3AQ02505 3323 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 A0A1B0GUA9 196 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 FSCN2O14926 492 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 CSPG5O95196 566 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 ARF4P18085 180 aaPredicted RBP12.17□□□□□ -0.46
CTSB-207ENST00000524654 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
CTSB-207ENST00000524654 CDC25AP30304 524 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.46
CTSB-207ENST00000524654 PPM1AP35813 382 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 ERVFC1P60507 584 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 NCBP1Q09161 790 aaKnown RBP12.17□□□□□ -0.46
CTSB-207ENST00000524654 NOMO2Q5JPE7 1267 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 ARL6IP4Q66PJ3 421 aaKnown RBP12.17□□□□□ -0.46
CTSB-207ENST00000524654 NOTUMQ6P988 496 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 BRAPQ7Z569 592 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 ADGRD2Q7Z7M1 963 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 SLC39A11Q8N1S5 342 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 BSNDQ8WZ55 320 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 MRPS27Q92552 414 aaKnown RBP12.17□□□□□ -0.46
CTSB-207ENST00000524654 CCDC51Q96ER9 411 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 NECAB3Q96P71 396 aaPredicted RBP12.17□□□□□ -0.46
CTSB-207ENST00000524654 EIF2AQ9BY44 585 aaKnown RBP12.17□□□□□ -0.46
CTSB-207ENST00000524654 CSRNP2Q9H175 543 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 FZD8Q9H461 694 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 TLR9Q9NR96 1032 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 TBC1D13Q9NVG8 400 aa12.17□□□□□ -0.46
CTSB-207ENST00000524654 SPG21Q9NZD8 308 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms