RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 KRT17Q04695 432 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 SIGLEC14Q08ET2 396 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 TBC1D8BQ0IIM8 1120 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 CBX2Q14781 532 aaPredicted RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 KLHL40Q2TBA0 621 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 FAM102BQ5T8I3 360 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 MCTP1Q6DN14 999 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 SWSAP1Q6NVH7 229 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 TMC7Q7Z402 723 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 NOSTRINQ8IVI9 506 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 SMAP1Q8IYB5 467 aaPredicted RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 LRRC71Q8N4P6 559 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 FBXL6Q8N531 539 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 TDRD5Q8NAT2 981 aaKnown RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 PRSS33Q8NF86 280 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 BBXQ8WY36 941 aaPredicted RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 MRPS27Q92552 414 aaKnown RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 CASP10Q92851 521 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 ATOH1Q92858 354 aaPredicted RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 TMEM169Q96HH4 297 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 DOCK6Q96HP0 2047 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 ZNF668Q96K58 619 aaPredicted RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 RIT2Q99578 217 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 MRPL9Q9BYD2 267 aaKnown RBP7.31□□□□□ -1.24
NUP98-213ENST00000524563 GRPEL1Q9HAV7 217 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 DISC1Q9NRI5 854 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 TMEM161AQ9NX61 479 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 CLEC1BQ9P126 229 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 GABBR1Q9UBS5 961 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 KIF3AQ9Y496 699 aa7.31□□□□□ -1.24
NUP98-213ENST00000524563 RIF1Q5UIP0 2472 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 TRIOO75962 3097 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 C9IYK1 514 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 EML1O00423 815 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 TBX3O15119 743 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 MAGEB2O15479 319 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 ZNF862O60290 1169 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 NEMFO60524 1076 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 GFRA3O60609 400 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 C22orf31O95567 290 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 OATP04181 439 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 ATF7P17544 494 aaPredicted RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 ATP2B1P20020 1258 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 SFPQP23246 707 aaKnown RBP eCLIP7.3□□□□□ -1.24
NUP98-213ENST00000524563 TOB1P50616 345 aaPredicted RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 JAK3P52333 1124 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 CRYBB1P53674 252 aaPredicted RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 NLRP11P59045 1033 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 ZNF445P59923 1031 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 RBM10P98175 930 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 RNASELQ05823 741 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 SPIRE1Q08AE8 756 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 MTMR3Q13615 1198 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 GNL2Q13823 731 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 CAMK1Q14012 370 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 UGCGQ16739 394 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 PTPN21Q16825 1174 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 RARS2Q5T160 578 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 FOXD4L5Q5VV16 416 aaPredicted RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 TWF2Q6IBS0 349 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 ANKRD54Q6NXT1 300 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 KCNT2Q6UVM3 1135 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 HELQQ8TDG4 1101 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 TMEM40Q8WWA1 233 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 FOXD4L4Q8WXT5 416 aaPredicted RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 NAP1L4Q99733 375 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 GBP3Q9H0R5 595 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 TMEM60Q9H2L4 133 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 NGRNQ9NPE2 291 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 RRAGDQ9NQL2 400 aaPredicted RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 RGS18Q9NS28 235 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 TYW1Q9NV66 732 aaKnown RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 DACT1Q9NYF0 836 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 SPG21Q9NZD8 308 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 INPP5FQ9Y2H2 1132 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 PCDHA10Q9Y5I2 948 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 MAFBQ9Y5Q3 323 aaPredicted RBP7.3□□□□□ -1.24
NUP98-213ENST00000524563 RALGAPA1Q6GYQ0 2036 aa7.3□□□□□ -1.24
NUP98-213ENST00000524563 WDFY4Q6ZS81 3184 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 FANCMQ8IYD8 2048 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 ZBTB42B2RXF5 422 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 LOC730098B7Z3J9 87 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 H3BQV1 296 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 BRD1O95696 1058 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 PDIA4P13667 645 aaKnown RBP7.29□□□□□ -1.24
NUP98-213ENST00000524563 HOXB8P17481 243 aaPredicted RBP7.29□□□□□ -1.24
NUP98-213ENST00000524563 NCLP19338 710 aaKnown RBP7.29□□□□□ -1.24
NUP98-213ENST00000524563 SFNP31947 248 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 MCM7P33993 719 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 CLCN1P35523 988 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 MTHFRP42898 656 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 VCPP55072 806 aaKnown RBP7.29□□□□□ -1.24
NUP98-213ENST00000524563 ERVFC1P60507 584 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 PPP2R5CQ13362 524 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 PKP1Q13835 747 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 CALCRLQ16602 461 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 MTERF2Q49AM1 385 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 TTC38Q5R3I4 469 aa7.29□□□□□ -1.24
NUP98-213ENST00000524563 LARP1BQ659C4 914 aaKnown RBP7.29□□□□□ -1.24
NUP98-213ENST00000524563 EFCAB12Q6NXP0 572 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms