RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TMOD1P28289 359 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 GTF2H1P32780 548 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 ARL2P36404 184 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 RGS2P41220 211 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 VAMP7P51809 220 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 ETF1P62495 437 aaKnown RBP10.88□□□□□ -0.67
VPS13B-212ENST00000524330 MYL7Q01449 175 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 FSTL1Q12841 308 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 TUBB2AQ13885 445 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 ASIC2Q16515 512 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 CST9Q5W186 159 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 PDXDC1Q6P996 788 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 PPTC7Q8NI37 304 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 TMC2Q8TDI7 906 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 POMGNT1Q8WZA1 660 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 HHIPL1Q96JK4 782 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 FGD4Q96M96 766 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 EIF3CQ99613 913 aaKnown RBP10.88□□□□□ -0.67
VPS13B-212ENST00000524330 TINF2Q9BSI4 451 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 TUBB2BQ9BVA1 445 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 HAUS4Q9H6D7 363 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 GPBP1L1Q9HC44 474 aaPredicted RBP10.88□□□□□ -0.67
VPS13B-212ENST00000524330 GPRC5CQ9NQ84 441 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 ARID2Q68CP9 1835 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 WDR81Q562E7 1941 aa10.88□□□□□ -0.67
VPS13B-212ENST00000524330 LRRC37A2A6NM11 1700 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 ZNF236Q9UL36 1845 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 TMEM150BA6NC51 233 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 PMM2O15305 246 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 PPFIA4O75335 1185 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 SERPING1P05155 500 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 FERP16591 822 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 CNGA1P29973 690 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 CASQ1P31415 396 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 MATR3P43243 847 aaKnown RBP eCLIP10.87□□□□□ -0.67
VPS13B-212ENST00000524330 FMO5P49326 533 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 POLR2FP61218 127 aaKnown RBP10.87□□□□□ -0.67
VPS13B-212ENST00000524330 CDC42EP1Q00587 391 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 KCNA1Q09470 495 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 MAP2K5Q13163 448 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 SURF1Q15526 300 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 TARBP2Q15633 366 aaKnown RBP10.87□□□□□ -0.67
VPS13B-212ENST00000524330 DUSP28Q4G0W2 176 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 TDRD12Q587J7 1177 aaKnown RBP10.87□□□□□ -0.67
VPS13B-212ENST00000524330 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 ZNF662Q6ZS27 426 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 SAPCD2Q86UD0 394 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 IFNL1Q8IU54 200 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 GPD1LQ8N335 351 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 SLC35C1Q96A29 364 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 MAML3Q96JK9 1138 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 SH2D3AQ9BRG2 576 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 NHEJ1Q9H9Q4 299 aaPredicted RBP10.87□□□□□ -0.67
VPS13B-212ENST00000524330 XPNPEP1Q9NQW7 623 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 AGPAT5Q9NUQ2 364 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 GCNT4Q9P109 453 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 ARHGAP28Q9P2N2 729 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 ZHX1Q9UKY1 873 aaPredicted RBP10.87□□□□□ -0.67
VPS13B-212ENST00000524330 ABT1Q9ULW3 272 aaKnown RBP10.87□□□□□ -0.67
VPS13B-212ENST00000524330 TLL2Q9Y6L7 1015 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 PLXNA1Q9UIW2 1896 aa10.87□□□□□ -0.67
VPS13B-212ENST00000524330 ZNF233A6NK53 670 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 LRRC53A6NM62 1247 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 TLR2O60603 784 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 ARIH2O95376 493 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 PIGRP01833 764 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 ATP4AP20648 1035 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 STAT1P42224 750 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 CASP4P49662 377 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 GNG11P61952 73 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 ARHGAP1Q07960 439 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 KCNMA1Q12791 1236 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 KIF5AQ12840 1032 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 ACVR2BQ13705 512 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 RAPGEF1Q13905 1077 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 PLCB4Q15147 1175 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 DGKDQ16760 1214 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 KLHDC7AQ5VTJ3 777 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 TAPT1Q6NXT6 567 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 RAD9BQ6WBX8 426 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 ZPBP2Q6X784 338 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 TOGARAM2Q6ZUX3 1019 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 APBB1IPQ7Z5R6 666 aaPredicted RBP10.86□□□□□ -0.67
VPS13B-212ENST00000524330 KSR1Q8IVT5 923 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 REXO1L1PQ8IX06 675 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 OR6J1Q8NGC5 347 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 TMEM143Q96AN5 459 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 BORCS6Q96GS4 357 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 FNBP1Q96RU3 617 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 PCYT2Q99447 389 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 PTPN18Q99952 460 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 MRPL4Q9BYD3 311 aaKnown RBP10.86□□□□□ -0.67
VPS13B-212ENST00000524330 PCIF1Q9H4Z3 704 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 CPA4Q9UI42 421 aa10.86□□□□□ -0.67
VPS13B-212ENST00000524330 DOCK5Q9H7D0 1870 aa10.85□□□□□ -0.67
VPS13B-212ENST00000524330 RRN3P2A6NIE6 340 aa10.85□□□□□ -0.67
VPS13B-212ENST00000524330 TMEM88BA6NKF7 163 aa10.85□□□□□ -0.67
VPS13B-212ENST00000524330 USP27XA6NNY8 438 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms