RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 GDPD5Q8WTR4 605 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 KIFAP3Q92845 792 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 MRPL38Q96DV4 380 aaKnown RBP23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 PRIMPOLQ96LW4 560 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 TIPINQ9BVW5 301 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 POLR3FQ9H1D9 316 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 BHMT2Q9H2M3 363 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 BMP2KQ9NSY1 1161 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 MTUS1Q9ULD2 1270 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 MYH11P35749 1972 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 VWA3AA6NCI4 1184 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 ATF7P17544 494 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 CTNNB1P35222 781 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 GPM6BQ13491 265 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 PPP2R5AQ15172 486 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 FAM102BQ5T8I3 360 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 TWF2Q6IBS0 349 aaKnown RBP23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 SLC17A8Q8NDX2 589 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 CNNM3Q8NE01 707 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 AAASQ9NRG9 546 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 FAM105AQ9NUU6 356 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 RNF19AQ9NV58 838 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 KCND2Q9NZV8 630 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 TTC28Q96AY4 2481 aa23.16■■□□□ 1.3
TRAPPC9-215ENST00000524162 A0A087WWV3 80 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 ERLIN2O94905 339 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 NAMPTP43490 491 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 MBTD1Q05BQ5 628 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 SF3A1Q15459 793 aaKnown RBP23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 FAM187BQ17R55 369 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 PPP4R3CPQ6ZMV5 832 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 MRPL10Q7Z7H8 261 aaKnown RBP23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 CASD1Q96PB1 797 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 MRPL9Q9BYD2 267 aaKnown RBP23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 C2orf40Q9H1Z8 148 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 C17orf75Q9HAS0 396 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 ATG2AQ2TAZ0 1938 aa23.15■■□□□ 1.3
TRAPPC9-215ENST00000524162 TBKBP1A7MCY6 615 aa23.14■■□□□ 1.29
TRAPPC9-215ENST00000524162 PP2D1A8MPX8 630 aa23.14■■□□□ 1.29
TRAPPC9-215ENST00000524162 AMHR2Q16671 573 aa23.14■■□□□ 1.29
TRAPPC9-215ENST00000524162 NOTUMQ6P988 496 aa23.14■■□□□ 1.29
TRAPPC9-215ENST00000524162 ABI1Q8IZP0 508 aa23.14■■□□□ 1.29
TRAPPC9-215ENST00000524162 LRRC43Q8N309 656 aa23.14■■□□□ 1.29
TRAPPC9-215ENST00000524162 PGBD4Q96DM1 585 aa23.14■■□□□ 1.29
TRAPPC9-215ENST00000524162 KCNG1Q9UIX4 513 aa23.14■■□□□ 1.29
TRAPPC9-215ENST00000524162 INO80B-WBP1J3KQ70 363 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 TSPAN1O60635 241 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 FGFR1P11362 822 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 CDC25AP30304 524 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 UBE3AQ05086 875 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 PTPAQ15257 358 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 TIGD5Q53EQ6 642 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 FZD8Q9H461 694 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 GPRC5CQ9NQ84 441 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 PRMT7Q9NVM4 692 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 PLAGL2Q9UPG8 496 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 PCDHB12Q9Y5F1 795 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 ZMYM2Q9UBW7 1377 aa23.13■■□□□ 1.29
TRAPPC9-215ENST00000524162 PHLPP2Q6ZVD8 1323 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 CNTNAP2Q9UHC6 1331 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 LAG3P18627 525 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 GUCY2CP25092 1073 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 UBA7P41226 1012 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 GATMP50440 423 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 EFNA5P52803 228 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 TMEM119Q4V9L6 283 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 PAN2Q504Q3 1202 aaKnown RBP23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 CLLU1OSQ5K130 101 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 ZBTB8OSQ8IWT0 167 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 SYT2Q8N9I0 419 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 ATXN2LQ8WWM7 1075 aaKnown RBP23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 IFT74Q96LB3 600 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 CWH43Q9H720 699 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 PLXNA4Q9HCM2 1894 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 UBN1Q9NPG3 1134 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 TYW1Q9NV66 732 aaKnown RBP23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 COG5Q9UP83 839 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 PCDHB2Q9Y5E7 798 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 XIRP2A4UGR9 3374 aa23.12■■□□□ 1.29
TRAPPC9-215ENST00000524162 A0A1B0GUA9 196 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 E9PMD0 336 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 NCLP19338 710 aaKnown RBP23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 UBXN11Q5T124 520 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 RINT1Q6NUQ1 792 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 C1orf186Q6ZWK4 172 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 CALML4Q96GE6 196 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 CDK5RAP3Q96JB5 506 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 DRC1Q96MC2 740 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 PNMA5Q96PV4 448 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 CCSER1Q9C0I3 900 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 CSRNP2Q9H175 543 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 THEGQ9P2T0 379 aa23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 SRPRBQ9Y5M8 271 aaKnown RBP23.11■■□□□ 1.29
TRAPPC9-215ENST00000524162 VCANP13611 3396 aa23.1■■□□□ 1.29
TRAPPC9-215ENST00000524162 SPTBN5Q9NRC6 3674 aaKnown RBP23.1■■□□□ 1.29
TRAPPC9-215ENST00000524162 LRRIQ4A6NIV6 560 aa23.1■■□□□ 1.29
TRAPPC9-215ENST00000524162 INPPL1O15357 1258 aa23.1■■□□□ 1.29
TRAPPC9-215ENST00000524162 HSP90AA1P07900 732 aaKnown RBP23.1■■□□□ 1.29
TRAPPC9-215ENST00000524162 PPM1AP35813 382 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms