RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 TRIM43BA6NCK2 446 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 SEPT4O43236 478 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 STRNO43815 780 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 PGK2P07205 417 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 AKR1B1P15121 316 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 PDE6AP16499 860 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 ICA1Q05084 483 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 NCAPHQ15003 741 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 LRRC41Q15345 812 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 CPSF6Q16630 551 aaKnown RBP eCLIP6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 CCDC144BQ3MJ40 725 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 FAM47AQ5JRC9 791 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 OLFML2BQ68BL8 750 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 FAM109BQ6ICB4 259 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 KIAA1211LQ6NV74 962 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 CEP85Q6P2H3 762 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 C6orf15Q6UXA7 325 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 ERC1Q8IUD2 1116 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 LCORLQ8N3X6 602 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 MAFAQ8NHW3 353 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 MYLIPQ8WY64 445 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 MKL1Q969V6 931 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 TRIM43Q96BQ3 446 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 ASPNQ9BXN1 380 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 OSBPL2Q9H1P3 480 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 SEMA6BQ9H3T3 888 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 ARMT1Q9H993 441 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 PDLIM7Q9NR12 457 aa6.29□□□□□ -1.4
CTNNA1-239ENST00000523685 CYP2D7A0A087X1C5 515 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 C9IYK1 514 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 CCER2I3L3R5 266 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 PRKAB2O43741 272 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 PQBP1O60828 265 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 MBD4O95243 580 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 GJB6O95452 261 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 CBX7O95931 251 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 PGK1P00558 417 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 IFIT2P09913 472 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 FURINP09958 794 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 RARBP10826 455 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 FCER1AP12319 257 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 FOSL2P15408 326 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 KIR3DL1P43629 444 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 TLE2Q04725 743 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 GABPAQ06546 454 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 TTF1Q15361 905 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 TDRD10Q5VZ19 366 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 TMEM179Q6ZVK1 233 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 PPFIBP1Q86W92 1011 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 CCDC144CPQ8IYA2 1237 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 STK11IPQ8N1F8 1099 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 MB21D1Q8N884 522 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 SHCBP1Q8NEM2 672 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 PANK1Q8TE04 598 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 KLHL6Q8WZ60 621 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 MAML3Q96JK9 1138 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 RNPC3Q96LT9 517 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 MMP19Q99542 508 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 MKRN2Q9H000 416 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 MROH8Q9H579 483 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 SH2D4AQ9H788 454 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 ZSWIM4Q9H7M6 989 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 DCP1AQ9NPI6 582 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 XPNPEP3Q9NQH7 507 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 FBXO28Q9NVF7 368 aa6.28□□□□□ -1.4
CTNNA1-239ENST00000523685 MYH1P12882 1939 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 B2RBV5 119 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 SMIM22K7EJ46 135 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 LRRN2O75325 713 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 CLTBP09497 229 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 EEF2P13639 858 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 TAL1P17542 331 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 ITGB8P26012 769 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 AUHQ13825 339 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 KCTD2Q14681 263 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 TMEM132BQ14DG7 1078 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 ANKRD39Q53RE8 183 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 HSP90AB4PQ58FF6 505 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 AXDND1Q5T1B0 1012 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 C22orf34Q6ZV56 151 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 RNF180Q86T96 592 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 ZDHHC13Q8IUH4 622 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 CLASRPQ8N2M8 674 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 CCDC113Q9H0I3 377 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 TTYH1Q9H313 450 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 BOLA2Q9H3K6 86 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 VCPKMTQ9H867 229 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 FAM86C1Q9NVL1 165 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 SWAP70Q9UH65 585 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 KCNH3Q9ULD8 1083 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 TMX2Q9Y320 296 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 CDK5RAP2Q96SN8 1893 aa6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 MYO5AQ9Y4I1 1855 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-239ENST00000523685 A0A1W2PQ45 241 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 A0A1W2PQY0 241 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 TCRBV5S4A2TA0A5A2 114 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 PRR33A8MZF0 331 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms