RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	BBC3	Q96PG8	261 aa	Predicted RBP	6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	SLC9A7	Q96T83	725 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	MYD88	Q99836	296 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	C17orf80	Q9BSJ5	609 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	SMOC2	Q9H3U7	446 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	CLDND1	Q9NY35	253 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	MAP3K20	Q9NYL2	800 aa	Known RBP	6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	TMOD2	Q9NZR1	351 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	SFMBT1	Q9UHJ3	866 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	PPP1R9A	Q9ULJ8	1098 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	STRIP2	Q9ULQ0	834 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	FAM50B	Q9Y247	325 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	ELP1	O95163	1332 aa		6.14	□□□□□ -1.43
PABPC1-223	ENST00000523636	KRBA1	A5PL33	1030 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	ENPP3	O14638	875 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	FANCG	O15287	622 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	CTAGE5	O15320	804 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	LINC01565	O15544	149 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	PI15	O43692	258 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	ATE1	O95260	518 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	NOS3	P29474	1203 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	ICAM3	P32942	547 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	COPB2	P35606	906 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	AMPD3	Q01432	767 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	SMAD4	Q13485	552 aa	Known RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	DHX8	Q14562	1220 aa	Known RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	ANGPT1	Q15389	498 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	PTPN21	Q16825	1174 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	SEZ6	Q53EL9	994 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	PPM1J	Q5JR12	505 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	ODR4	Q5SWX8	454 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	CWF19L1	Q69YN2	538 aa	Known RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	HHIPL2	Q6UWX4	724 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	AGGF1	Q8N302	714 aa	eCLIP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	C12orf50	Q8NA57	414 aa	Predicted RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	SUMF1	Q8NBK3	374 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	RNF214	Q8ND24	703 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	FBXO27	Q8NI29	283 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	KCNG4	Q8TDN1	519 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	RUBCN	Q92622	972 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	MSLNL	Q96KJ4	702 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	C8orf48	Q96LL4	319 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	INO80B	Q9C086	356 aa	Predicted RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	DDX4	Q9NQI0	724 aa	Known RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	GEMIN8	Q9NWZ8	242 aa	Known RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	TPX2	Q9ULW0	747 aa	Known RBP	6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	MROH7	Q68CQ1	1323 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	MYH2	Q9UKX2	1941 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	MYH13	Q9UKX3	1938 aa		6.13	□□□□□ -1.43
PABPC1-223	ENST00000523636	ATM	Q13315	3056 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	TLR3	O15455	904 aa	Known RBP	6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	ALX3	O95076	343 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	EYA4	O95677	639 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	IGKV5-2	P06315	115 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	ASGR1	P07306	291 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	DEFB103A	P81534	67 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	SHC2	P98077	582 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	PDE4B	Q07343	736 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	HYAL1	Q12794	435 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	CCDC96	Q2M329	555 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	TCTN1	Q2MV58	587 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	EP400NL	Q6ZTU2	488 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	MICAL3	Q7RTP6	2002 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	TICRR	Q7Z2Z1	1910 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	DEFB128	Q7Z7B8	93 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	NUP133	Q8WUM0	1156 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	FAM46A	Q96IP4	442 aa	Known RBP	6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	MAML3	Q96JK9	1138 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	FANCD2OS	Q96PS1	177 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	TGS1	Q96RS0	853 aa	Known RBP	6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	TRPV6	Q9H1D0	765 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	EHMT1	Q9H9B1	1298 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	BRMS1	Q9HCU9	246 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	DISC1	Q9NRI5	854 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	GINM1	Q9NU53	330 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	CWC25	Q9NXE8	425 aa	Predicted RBP	6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	TSPYL4	Q9UJ04	414 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	ANGPTL2	Q9UKU9	493 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	AP4E1	Q9UPM8	1137 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	EFR3B	Q9Y2G0	817 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	HIF3A	Q9Y2N7	669 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	RABGAP1	Q9Y3P9	1069 aa		6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	LRRFIP2	Q9Y608	721 aa	Known RBP	6.12	□□□□□ -1.43
PABPC1-223	ENST00000523636	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	SRRM3	A6NNA2	597 aa	Predicted RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	SART1	O43290	800 aa	Known RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	B4GALT4	O60513	344 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	CSF1R	P07333	972 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	IMPDH2	P12268	514 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	GLB1	P16278	677 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	CD53	P19397	219 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	CST5	P28325	142 aa	Predicted RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	CDK8	P49336	464 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	RGS3	P49796	1198 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	BACE1	P56817	501 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	POU5F1	Q01860	360 aa	Known RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	CHAF1A	Q13111	956 aa	Predicted RBP	6.11	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms