RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PTMAP06454 111 aaKnown RBP10.26□□□□□ -0.77
SDCBP-212ENST00000523483 GNAT1P11488 350 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 OSTNP61366 133 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 ITGA7Q13683 1181 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 MXD4Q14582 209 aaPredicted RBP10.26□□□□□ -0.77
SDCBP-212ENST00000523483 DCAF17Q5H9S7 520 aaPredicted RBP10.26□□□□□ -0.77
SDCBP-212ENST00000523483 MARCH8Q5T0T0 291 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 LHX8Q68G74 356 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 TTI2Q6NXR4 508 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 ARMCX5Q6P1M9 558 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 SAAL1Q96ER3 474 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 ACCSQ96QU6 501 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 FIZ1Q96SL8 496 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 TARS2Q9BW92 718 aaKnown RBP10.26□□□□□ -0.77
SDCBP-212ENST00000523483 TBX20Q9UMR3 447 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 UBASH3AP57075 661 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 TFDP1Q14186 410 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 SEZ6Q53EL9 994 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 GDF6Q6KF10 455 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 EXOC8Q8IYI6 725 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 CBWD1Q9BRT8 395 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 PDLIM7Q9NR12 457 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 KCNJ18B7U540 433 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 IKBKBO14920 756 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 CETN3O15182 167 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 AP5Z1O43299 807 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 CALUO43852 315 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 HOXD13P35453 343 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 ARL2P36404 184 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 NAMPTP43490 491 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 FANCCQ00597 558 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 KCNJ12Q14500 433 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 MAPK6Q16659 721 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 FAM212AQ96EL1 285 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 CNOT6LQ96LI5 555 aaKnown RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 PCMTD1Q96MG8 357 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 CEP89Q96ST8 783 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 N4BP3O15049 544 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 KPNA6O60684 536 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 NR3C1P04150 777 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 HOXD8P13378 290 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 PPP1R2P41236 205 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 CASP4P49662 377 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 FKBP3Q00688 224 aaKnown RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 NFX1Q12986 1120 aaKnown RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 PTGISQ16647 500 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 CENPPQ6IPU0 288 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 KIAA0319LQ8IZA0 1049 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 DUSP9Q99956 384 aaKnown RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 BPIFA3Q9BQP9 254 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 GTPBP4Q9BZE4 634 aaKnown RBP10.25□□□□□ -0.77
SDCBP-212ENST00000523483 PCDH10Q9P2E7 1040 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 EXOC7Q9UPT5 735 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 MYH11P35749 1972 aa10.25□□□□□ -0.77
SDCBP-212ENST00000523483 B4GALT5O43286 388 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 PQBP1O60828 265 aaKnown RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 ERLIN2O94905 339 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 THPOP40225 353 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 FBXO46Q6PJ61 603 aaPredicted RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 FILIP1Q7Z7B0 1213 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 ZNF507Q8TCN5 953 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 ZBTB45Q96K62 511 aaPredicted RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 XPO4Q9C0E2 1151 aaKnown RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 TMEM206Q9H813 350 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 MINDY3Q9H8M7 445 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 C17orf75Q9HAS0 396 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 TYW1Q9NV66 732 aaKnown RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 A0A1W2PQ45 241 aaPredicted RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 A0A1W2PQY0 241 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 PRKCBP05771 671 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 PHKA2P46019 1235 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 LRRC63Q05C16 580 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 U2AF1L4Q8WU68 220 aaKnown RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 CCDC127Q96BQ5 260 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 TRPV6Q9H1D0 765 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 KCTD10Q9H3F6 313 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■■■■■ 96.1
SDCBP-212ENST00000523483 AGPAT3Q9NRZ7 376 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 TTLL13PA6NNM8 815 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 ANKRD63C9JTQ0 380 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 M0QZ92 97 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 EIF3DO15371 548 aaKnown RBP eCLIP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 TGFB1I1O43294 461 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 GAS2O43903 313 aaKnown RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 MAPTP10636 758 aaKnown RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 RPL13P26373 211 aaKnown RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 NCKAP1LP55160 1127 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 ZSWIM2Q8NEG5 633 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 KLHDC9Q8NEP7 349 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 CPB2Q96IY4 423 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 UPF3AQ9H1J1 476 aaKnown RBP10.24□□□□□ -0.77
SDCBP-212ENST00000523483 CDHR5Q9HBB8 845 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 GTF2IRD1Q9UHL9 959 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 FRMD4BQ9Y2L6 1034 aa10.24□□□□□ -0.77
SDCBP-212ENST00000523483 TPM2P07951 284 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 EPM2AIP1Q7L775 607 aaPredicted RBP10.23□□□□□ -0.77
SDCBP-212ENST00000523483 CATSPER4Q7RTX7 472 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 SPIRE2Q8WWL2 714 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 WDR81Q562E7 1941 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 HAS3O00219 553 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms