RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 DNAJB4Q9UDY4 337 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 PSMD10O75832 226 aa29.13■■■□□ 2.25
PVT1-219ENST00000523427 SLC22A17Q8WUG5 538 aa29.13■■■□□ 2.25
PVT1-219ENST00000523427 SNX14Q9Y5W7 946 aa29.13■■■□□ 2.25
PVT1-219ENST00000523427 SLC11A1P49279 550 aa29.12■■■□□ 2.25
PVT1-219ENST00000523427 POLGP54098 1239 aaPredicted RBP29.12■■■□□ 2.25
PVT1-219ENST00000523427 CDC42EP1Q00587 391 aa29.12■■■□□ 2.25
PVT1-219ENST00000523427 ZDHHC14Q8IZN3 488 aa29.12■■■□□ 2.25
PVT1-219ENST00000523427 FLCNQ8NFG4 579 aa29.12■■■□□ 2.25
PVT1-219ENST00000523427 INO80BQ9C086 356 aaPredicted RBP29.12■■■□□ 2.25
PVT1-219ENST00000523427 OFD1O75665 1012 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 STBD1O95210 358 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 SKIP12755 728 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 NUBP1P53384 320 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 GIT2Q14161 759 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 PLA2G4FQ68DD2 849 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 ASTLQ6HA08 431 aaPredicted RBP29.11■■■□□ 2.25
PVT1-219ENST00000523427 ASCL5Q7RTU5 278 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 PLCD3Q8N3E9 789 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 CEP89Q96ST8 783 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 CFAP54Q96N23 3096 aa29.11■■■□□ 2.25
PVT1-219ENST00000523427 IFNAR1P17181 557 aa29.1■■■□□ 2.25
PVT1-219ENST00000523427 RPS6KB1P23443 525 aa29.1■■■□□ 2.25
PVT1-219ENST00000523427 ZNF280BQ86YH2 543 aa29.1■■■□□ 2.25
PVT1-219ENST00000523427 RDM1Q8NG50 284 aa29.1■■■□□ 2.25
PVT1-219ENST00000523427 VN1R3Q9BXE9 311 aa29.1■■■□□ 2.25
PVT1-219ENST00000523427 CYP26B1Q9NR63 512 aa29.1■■■□□ 2.25
PVT1-219ENST00000523427 IGKV6-21A0A0C4DH24 114 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 B4GALT3O60512 393 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 KLRC2P26717 231 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 Q4G0T1 1027 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 ZNF410Q86VK4 478 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 TRAIPQ9BWF2 469 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 PCDHB2Q9Y5E7 798 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 IRAK3Q9Y616 596 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 NID2Q14112 1375 aa29.09■■■□□ 2.25
PVT1-219ENST00000523427 MAFO75444 373 aaPredicted RBP29.08■■■□□ 2.25
PVT1-219ENST00000523427 PDIA3P30101 505 aaKnown RBP29.08■■■□□ 2.25
PVT1-219ENST00000523427 PTPN14Q15678 1187 aa29.08■■■□□ 2.25
PVT1-219ENST00000523427 URGCPQ8TCY9 931 aa29.08■■■□□ 2.25
PVT1-219ENST00000523427 ACSF2Q96CM8 615 aaPredicted RBP29.08■■■□□ 2.25
PVT1-219ENST00000523427 PGBD4Q96DM1 585 aa29.08■■■□□ 2.25
PVT1-219ENST00000523427 PCDHA4Q9UN74 947 aa29.08■■■□□ 2.25
PVT1-219ENST00000523427 USTQ9Y2C2 406 aa29.08■■■□□ 2.25
PVT1-219ENST00000523427 RIF1Q5UIP0 2472 aaKnown RBP29.08■■■□□ 2.25
PVT1-219ENST00000523427 MYBP10242 640 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 HSPA4P34932 840 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 RAB27AP51159 221 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 AFF1P51825 1210 aaKnown RBP29.07■■■□□ 2.24
PVT1-219ENST00000523427 CCDC149Q6ZUS6 474 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 ANO5Q75V66 913 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 PPFIBP1Q86W92 1011 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 KCNB2Q92953 911 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 KLHL5Q96PQ7 755 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 FAM193BQ96PV7 902 aaPredicted RBP29.07■■■□□ 2.24
PVT1-219ENST00000523427 EMILIN2Q9BXX0 1053 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 SLKQ9H2G2 1235 aaPredicted RBP29.07■■■□□ 2.24
PVT1-219ENST00000523427 SFXN1Q9H9B4 322 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 SH3GLB2Q9NR46 395 aa29.07■■■□□ 2.24
PVT1-219ENST00000523427 BMP2KQ9NSY1 1161 aaPredicted RBP29.07■■■□□ 2.24
PVT1-219ENST00000523427 C2CD2LO14523 706 aa29.06■■■□□ 2.24
PVT1-219ENST00000523427 DDHD2O94830 711 aa29.06■■■□□ 2.24
PVT1-219ENST00000523427 SRGAP2CP0DJJ0 459 aa29.06■■■□□ 2.24
PVT1-219ENST00000523427 NPEPPSP55786 919 aa29.06■■■□□ 2.24
PVT1-219ENST00000523427 SSRP1Q08945 709 aaKnown RBP29.06■■■□□ 2.24
PVT1-219ENST00000523427 GPR149Q86SP6 731 aa29.06■■■□□ 2.24
PVT1-219ENST00000523427 TRIM22Q8IYM9 498 aa29.06■■■□□ 2.24
PVT1-219ENST00000523427 LARP6Q9BRS8 491 aaKnown RBP29.06■■■□□ 2.24
PVT1-219ENST00000523427 C22orf23Q9BZE7 217 aa29.06■■■□□ 2.24
PVT1-219ENST00000523427 CARNS1A5YM72 827 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 ZNF623O75123 536 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 POMCP01189 267 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 CNPP09543 421 aaKnown RBP29.05■■■□□ 2.24
PVT1-219ENST00000523427 PSMC5P62195 406 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 AGMOQ6ZNB7 445 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 OTOP3Q7RTS5 596 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 FRMD5Q7Z6J6 570 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 BLIDQ8IZY5 108 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 RSPH1Q8WYR4 309 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 FAN1Q9Y2M0 1017 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 PLXNA3P51805 1871 aa29.05■■■□□ 2.24
PVT1-219ENST00000523427 SPTBN4Q9H254 2564 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 PRR23AA6NEV1 266 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 PROB1E7EW31 1015 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 ALDH2P05091 517 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 B3GNT9Q6UX72 402 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 ZNF579Q8NAF0 562 aaKnown RBP29.04■■■□□ 2.24
PVT1-219ENST00000523427 ETNPPLQ8TBG4 499 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 TMEM143Q96AN5 459 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 JPH2Q9BR39 696 aaPredicted RBP29.04■■■□□ 2.24
PVT1-219ENST00000523427 AGXT2Q9BYV1 514 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 RSAD1Q9HA92 442 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 IFT122Q9HBG6 1241 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 AGPAT5Q9NUQ2 364 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 DDX25Q9UHL0 483 aaKnown RBP29.04■■■□□ 2.24
PVT1-219ENST00000523427 FBXL21Q9UKT6 434 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 COL4A3BPQ9Y5P4 624 aa29.04■■■□□ 2.24
PVT1-219ENST00000523427 CYP3A7-CYP3A51PA0A087WV96 503 aa29.03■■■□□ 2.24
PVT1-219ENST00000523427 EML1O00423 815 aa29.03■■■□□ 2.24
PVT1-219ENST00000523427 CYP3A7P24462 503 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms