RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 DNAJC6O75061 913 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 CHRNA3P32297 505 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 RAD23BP54727 409 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 CATSPER4Q7RTX7 472 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 BRIP1Q9BX63 1249 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 DISP1Q96F81 1524 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 NFKBIAP25963 317 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 ANO5Q75V66 913 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 MXD3Q9BW11 206 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 TMCC1O94876 653 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 HLA-DPA1P20036 260 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 SIRT2Q8IXJ6 389 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 OXER1Q8TDS5 423 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 KIAA1586Q9HCI6 787 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 PCSK1NQ9UHG2 260 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 ATP7BP35670 1465 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 VAMP7P51809 220 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 TTC30BQ8N4P2 665 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 ULK4Q96C45 1275 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 E5RI56 91 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 ZBTB5O15062 677 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 CYP2D6P10635 497 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 GNA15P30679 374 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 GNL1P36915 607 aaPredicted RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 MTBPQ96DY7 904 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 ETNK1Q9HBU6 452 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 MOSPD1Q9UJG1 213 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 TSR3Q9UJK0 312 aaKnown RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 ARHGEF9O43307 516 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 HDAC4P56524 1084 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 SLC26A7Q8TE54 656 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 LZICQ8WZA0 190 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 CHCHD3Q9NX63 227 aaKnown RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 HPCAL4Q9UM19 191 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 KDM5CP41229 1560 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 MYBL1P10243 752 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 ZNF568Q3ZCX4 644 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 NAALADL2Q58DX5 795 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 RNF219Q5W0B1 726 aaPredicted RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 HEATR6Q6AI08 1181 aaKnown RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 LRRC8EQ6NSJ5 796 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 CCDC137Q6PK04 289 aaKnown RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 FAM196AQ6ZSG2 479 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 OLFM3Q96PB7 478 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 NR1H4Q96RI1 486 aaPredicted RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 EPC1Q9H2F5 836 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 DRAP1Q14919 205 aaPredicted RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
LAMA4-219ENST00000522006 FAM83BQ5T0W9 1011 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 TMEM179Q6ZVK1 233 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 CATSPER3Q86XQ3 398 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 TMEM260Q9NX78 707 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 ZNF212Q9UDV6 495 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 ITM2BQ9Y287 266 aa12.11□□□□□ -0.47
LAMA4-219ENST00000522006 FTLP02792 175 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 NCAPHQ15003 741 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 ZNF746Q6NUN9 644 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 CFAP69A5D8W1 941 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 SYNDIG1LA6NDD5 238 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 FAM187AA6NFU0 413 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 ATP1A1P05023 1023 aaKnown RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 CUL3Q13618 768 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 DGKHQ86XP1 1220 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 FMR1NBQ8N0W7 255 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 MAGEB5Q9BZ81 275 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 BSDC1Q9NW68 430 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 DONSONQ9NYP3 566 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 CFAP73A6NFT4 308 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 POTECB2RU33 542 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 ASAP2O43150 1006 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 PCYT1AP49585 367 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 GRAPQ13588 217 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 GRAPLQ8TC17 118 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 TBXAS1P24557 533 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 C1orf228Q6PIY5 440 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 DDIASQ8IXT1 998 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 PRMT1Q99873 361 aaKnown RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 FGFR4P22455 802 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 RNF135Q8IUD6 432 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 ASPSCR1Q9BZE9 553 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 OSBPL5Q9H0X9 879 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-219ENST00000522006 FBXL5Q9UKA1 691 aa12.1□□□□□ -0.47
LAMA4-219ENST00000522006 hCG_2014768A0A024R1R8 64 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms