RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 DENND3A2RUS2 1198 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 SOBPA7XYQ1 873 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 C1QTNF9BB2RNN3 333 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 TM4SF5O14894 197 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 C1QTNF9P0C862 333 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 KCNA2P16389 499 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 RFX1P22670 979 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 KRT76Q01546 638 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 PTPN14Q15678 1187 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 GNPTABQ3T906 1256 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 DCLRE1AQ6PJP8 1040 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 DGKHQ86XP1 1220 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 TBC1D10CQ8IV04 446 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 BCL7CQ8WUZ0 217 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 SEPT1Q8WYJ6 367 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 GLG1Q92896 1179 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 SFXN1Q9H9B4 322 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 SLC2A4RGQ9NR83 387 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 SPATA6Q9NWH7 488 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 PCDHB15Q9Y5E8 787 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 LAMA1P25391 3075 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 PATJQ8NI35 1801 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 RRN3P2A6NIE6 340 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 ANHXE9PGG2 379 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZBTB24O43167 697 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 RPS6KA5O75582 802 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZIC2O95409 532 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 POLR2MP0CAP2 368 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 CTSAP10619 480 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 RPIAP49247 311 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 HAND2P61296 217 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 PLCB4Q15147 1175 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 ASPRV1Q53RT3 343 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 FAM228AQ86W67 206 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 KIAA0319LQ8IZA0 1049 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 LRRC43Q8N309 656 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 PI4K2BQ8TCG2 481 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 MAP4K1Q92918 833 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 WDR6Q9NNW5 1121 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 GINS2Q9Y248 185 aa10.22□□□□□ -0.77
TRAPPC9-212ENST00000521944 FREM2Q5SZK8 3169 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 SMIM35A0A1B0GVV1 85 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 M0QZ92 97 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZBTB5O15062 677 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 LAMTOR5O43504 91 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 TBC1D4O60343 1298 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 LILRB3O75022 631 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 STAM2O75886 525 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 RPLP2P05387 115 aaKnown RBP10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 TDGF1P13385 188 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 METAP2P50579 478 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 CLCN4P51793 760 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 BCAR1P56945 870 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 GPC5P78333 572 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 FZD5Q13467 585 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 HTR4Q13639 388 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 LPAL2Q16609 132 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 MTHFD1LQ6UB35 978 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 LRSAM1Q6UWE0 723 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 C15orf39Q6ZRI6 1047 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 NME8Q8N427 588 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 KDF1Q8NAX2 398 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 SECISBP2LQ93073 1101 aaKnown RBP10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 SMARCAD1Q9H4L7 1026 aa10.21□□□□□ -0.77
TRAPPC9-212ENST00000521944 NEDD4P46934 1319 aa10.21□□□□□ -0.78
TRAPPC9-212ENST00000521944 LAMA4Q16363 1823 aa10.21□□□□□ -0.78
TRAPPC9-212ENST00000521944 MIA3Q5JRA6 1907 aa10.21□□□□□ -0.78
TRAPPC9-212ENST00000521944 KANSL1LA0AUZ9 987 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 SHISA7A6NL88 538 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 DHX16O60231 1041 aaKnown RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 CNPP09543 421 aaKnown RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 PARP1P09874 1014 aaKnown RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 ITGB5P18084 799 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 CD72P21854 359 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 GBP2P32456 591 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 CA8P35219 290 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 SNW1Q13573 536 aaKnown RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 FAM43BQ6ZT52 329 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 DDX53Q86TM3 631 aaKnown RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 ZNF598Q86UK7 904 aaKnown RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 OTUD7AQ8TE49 926 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 EVPLQ92817 2033 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 NXPE3Q969Y0 559 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 ZNF707Q96C28 371 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 KLHL5Q96PQ7 755 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 CELSR3Q9NYQ7 3312 aa10.2□□□□□ -0.78
TRAPPC9-212ENST00000521944 FAM170BA6NMN3 283 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 GPR182O15218 404 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 B4GALT3O60512 393 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 GPR32O75388 356 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 PAPLNO95428 1278 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 LAMP2P13473 410 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 KLRC1P26715 233 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 NONOQ15233 471 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 PTPRNQ16849 979 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 KIZQ2M2Z5 673 aa10.19□□□□□ -0.78
TRAPPC9-212ENST00000521944 PCNX4Q63HM2 1172 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms