RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 CLLU1OSQ5K130 101 aa12.59□□□□□ -0.39
CSMD1-210ENST00000521646 BMP8AQ7Z5Y6 402 aa12.59□□□□□ -0.39
CSMD1-210ENST00000521646 TMEM173Q86WV6 379 aaPredicted RBP12.59□□□□□ -0.39
CSMD1-210ENST00000521646 RPGRIP1Q96KN7 1286 aa12.59□□□□□ -0.39
CSMD1-210ENST00000521646 SDF4Q9BRK5 362 aa12.59□□□□□ -0.39
CSMD1-210ENST00000521646 FAM86C1Q9NVL1 165 aa12.59□□□□□ -0.39
CSMD1-210ENST00000521646 BARHL2Q9NY43 387 aa12.59□□□□□ -0.39
CSMD1-210ENST00000521646 FAM50BQ9Y247 325 aa12.59□□□□□ -0.39
CSMD1-210ENST00000521646 TMEM150BA6NC51 233 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 HBP1O60381 514 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 B4GALT3O60512 393 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 CSDE1O75534 798 aaKnown RBP12.58□□□□□ -0.4
CSMD1-210ENST00000521646 RPS6KA5O75582 802 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 PLPP4Q5VZY2 271 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 PDXDC2PQ6P474 469 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 PLA2G4DQ86XP0 818 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 TMTC2Q8N394 836 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 LRRC71Q8N4P6 559 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 FOXJ1Q92949 421 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.4
CSMD1-210ENST00000521646 PHF7Q9BWX1 381 aaPredicted RBP12.58□□□□□ -0.4
CSMD1-210ENST00000521646 TLE6Q9H808 572 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 ANO2Q9NQ90 1003 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 ZNF302Q9NR11 478 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 TLR9Q9NR96 1032 aa12.58□□□□□ -0.4
CSMD1-210ENST00000521646 MAFBQ9Y5Q3 323 aaPredicted RBP12.58□□□□□ -0.4
CSMD1-210ENST00000521646 MYH9P35579 1960 aaKnown RBP12.58□□□□□ -0.4
CSMD1-210ENST00000521646 MEIS3P2A8K0S8 358 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 BACH1O14867 736 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 STBD1O95210 358 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 CYP3A4P08684 503 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 WEE2P0C1S8 567 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 STAG3L1P0CL83 205 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 RTN1Q16799 776 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 TPRNQ4KMQ1 711 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 LLGL2Q6P1M3 1020 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 SLC24A5Q71RS6 500 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 NIPA1Q7RTP0 329 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 NME8Q8N427 588 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 BCL7CQ8WUZ0 217 aaPredicted RBP12.57□□□□□ -0.4
CSMD1-210ENST00000521646 PBXIP1Q96AQ6 731 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 CEP89Q96ST8 783 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 UPF3BQ9BZI7 483 aaKnown RBP12.57□□□□□ -0.4
CSMD1-210ENST00000521646 LRFN2Q9ULH4 789 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 PCDHB7Q9Y5E2 793 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 FRYLO94915 3013 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 MYO10Q9HD67 2058 aa12.57□□□□□ -0.4
CSMD1-210ENST00000521646 SPTBN4Q9H254 2564 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 KLF18A0A0U1RQI7 1052 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 M0QZ92 97 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 IPO5O00410 1097 aaKnown RBP12.56□□□□□ -0.4
CSMD1-210ENST00000521646 ZBTB43O43298 467 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-210ENST00000521646 PFKFB3Q16875 520 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-210ENST00000521646 ANKRD54Q6NXT1 300 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 TMEM184AQ6ZMB5 413 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 FAM174AQ8TBP5 190 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 NEK1Q96PY6 1258 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 SH2D3AQ9BRG2 576 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 VN1R3Q9BXE9 311 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 TMEM161AQ9NX61 479 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 DMXL1Q9Y485 3027 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 COL1A2P08123 1366 aa12.56□□□□□ -0.4
CSMD1-210ENST00000521646 DNAH14Q0VDD8 3507 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 GOLGA8AA7E2F4 631 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 GOLGA8BA8MQT2 603 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 NT5C1B-RDH14C9J2C7 533 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 TECP42680 631 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 SLC26A2P50443 739 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 NLRP11P59045 1033 aaKnown RBP12.55□□□□□ -0.4
CSMD1-210ENST00000521646 AP3B2Q13367 1082 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 ARID5BQ14865 1188 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 NTRK3Q16288 839 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 ZNF484Q5JVG2 852 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 DHX32Q7L7V1 743 aaKnown RBP12.55□□□□□ -0.4
CSMD1-210ENST00000521646 ECHDC2Q86YB7 292 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 THNSL1Q8IYQ7 743 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 MICAL1Q8TDZ2 1067 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 AUTS2Q8WXX7 1259 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
CSMD1-210ENST00000521646 PHKBQ93100 1093 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 MFSD14AQ96MC6 490 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 TCF25Q9BQ70 676 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 ZMYND12Q9H0C1 365 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 KCNH6Q9H252 994 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 POMKQ9H5K3 350 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 GABBR1Q9UBS5 961 aa12.55□□□□□ -0.4
CSMD1-210ENST00000521646 C2orf71A6NGG8 1288 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 MSH4O15457 936 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 DTNBO60941 627 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 BRD1O95696 1058 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 FOSP01100 380 aaPredicted RBP12.54□□□□□ -0.4
CSMD1-210ENST00000521646 AFF1P51825 1210 aaKnown RBP12.54□□□□□ -0.4
CSMD1-210ENST00000521646 PLCB3Q01970 1234 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 UBE3AQ05086 875 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 SIGLEC14Q08ET2 396 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 TSGA10IPQ3SY00 556 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms