RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DPYSL5Q9BPU6 564 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 TMPRSS5Q9H3S3 457 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 KCMF1Q9P0J7 381 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 SPO11Q9Y5K1 396 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 ANKRD50Q9ULJ7 1429 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 MAST1Q9Y2H9 1570 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 AGLP35573 1532 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 DNMT1P26358 1616 aaKnown RBP4.51□□□□□ -1.69
VPS13B-209ENST00000521559 POU3F2P20265 443 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-209ENST00000521559 SART3Q15020 963 aaKnown RBP4.51□□□□□ -1.69
VPS13B-209ENST00000521559 TBR1Q16650 682 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 TAF7LQ5H9L4 462 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 PRAMEF9Q5VWM5 478 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 ADGRE4PQ86SQ3 457 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 PHYKPLQ8IUZ5 450 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 GCDHQ92947 438 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-209ENST00000521559 NINJ1Q92982 152 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 C16orf92Q96LL3 132 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 PLA2G12BQ9BX93 195 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 PIF1Q9H611 641 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 KANSL2Q9H9L4 492 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 DENND2AQ9ULE3 1009 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 HECW2Q9P2P5 1572 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 RICTORQ6R327 1708 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 ARHGEF40Q8TER5 1519 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 DUOX2Q9NRD8 1548 aa4.51□□□□□ -1.69
VPS13B-209ENST00000521559 WASHC2CQ9Y4E1 1318 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 REREQ9P2R6 1566 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 INO80Q9ULG1 1556 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-209ENST00000521559 DIP2CQ9Y2E4 1556 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 HFM1A2PYH4 1435 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 NAIPQ13075 1403 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 ERBINQ96RT1 1412 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 SETD5Q9C0A6 1442 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 DVL2O14641 736 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 CYP27B1O15528 508 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 DAPK3O43293 454 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 SLC26A4O43511 780 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 CDC45O75419 566 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 ACO1P21399 889 aaKnown RBP4.5□□□□□ -1.69
VPS13B-209ENST00000521559 OCRLQ01968 901 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 HGFACQ04756 655 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 GRM7Q14831 915 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 R3HDM1Q15032 1099 aaKnown RBP4.5□□□□□ -1.69
VPS13B-209ENST00000521559 BMP8AQ7Z5Y6 402 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 SPRED1Q7Z699 444 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 PPM1KQ8N3J5 372 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 C7orf31Q8N865 590 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 SHCBP1Q8NEM2 672 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 OR14K1Q8NGZ2 314 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 CFHR4Q92496 578 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 RABGGTAQ92696 567 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 SLC7A6OSQ96CW6 309 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-209ENST00000521559 MPHOSPH9Q99550 1183 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 VPS11Q9H270 941 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 SLC6A15Q9H2J7 730 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 TOMM22Q9NS69 142 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 FANCLQ9NW38 375 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 AURKAIP1Q9NWT8 199 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-209ENST00000521559 PLA2G3Q9NZ20 509 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 SRRDQ9UH36 339 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 PLAAQ9Y263 795 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 CTDP1Q9Y5B0 961 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-209ENST00000521559 CD2APQ9Y5K6 639 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 KIDINS220Q9ULH0 1771 aa4.5□□□□□ -1.69
VPS13B-209ENST00000521559 GOLGA8BA8MQT2 603 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 MATN2O00339 956 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 IGSF3O75054 1194 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 F2P00734 622 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 SLC9A1P19634 815 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 CD40P25942 277 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 GDF5P43026 501 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 RGS3P49796 1198 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 ADAM15Q13444 863 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 MAN2A1Q16706 1144 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 SPDYAQ5MJ70 313 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 MAMDC4Q6UXC1 1216 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 LRRTM3Q86VH5 581 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 NIM1KQ8IY84 436 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 EFHBQ8N7U6 833 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 OR5AN1Q8NGI8 311 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 ELF4Q99607 663 aaPredicted RBP4.49□□□□□ -1.69
VPS13B-209ENST00000521559 FEZ1Q99689 392 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 POLR3BQ9NW08 1133 aaPredicted RBP4.49□□□□□ -1.69
VPS13B-209ENST00000521559 OXSMQ9NWU1 459 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 NUP155O75694 1391 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 ZMYM3Q14202 1370 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 KANK1Q14678 1352 aa4.49□□□□□ -1.69
VPS13B-209ENST00000521559 PLXNC1O60486 1568 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 CNTLNQ9NXG0 1405 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 ABCA6Q8N139 1617 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 A0A1W2PRX2 142 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 KPNA6O60684 536 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 FZD7O75084 574 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 C6P13671 934 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 TACR2P21452 398 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 PTX3P26022 381 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-209ENST00000521559 MSX2P35548 267 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-209ENST00000521559 SCNN1BP51168 640 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 ADCY2Q08462 1091 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms