RNA–Protein interactions for RNA: ENST00000521478.1

HOXA6-202, Transcript of homeobox A6, humanhuman

TSL 3

Gene HOXA6, Length 814 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-202ENST00000521478 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 LONRF3Q496Y0 759 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 NOMO2Q5JPE7 1267 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 PLA2G4FQ68DD2 849 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 GLB1LQ6UWU2 654 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 CATSPER4Q7RTX7 472 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 DDX53Q86TM3 631 aaKnown RBP16.68■□□□□ 0.26
HOXA6-202ENST00000521478 TMEM173Q86WV6 379 aaPredicted RBP16.68■□□□□ 0.26
HOXA6-202ENST00000521478 IGSF21Q96ID5 467 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 NECTIN4Q96NY8 510 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 PHF20Q9BVI0 1012 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 ZBP1Q9H171 429 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 IFT122Q9HBG6 1241 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 KCNMB3Q9NPA1 279 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 TBC1D13Q9NVG8 400 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 CDH22Q9UJ99 828 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 VAV3Q9UKW4 847 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 KCNJ14Q9UNX9 436 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 IRAK3Q9Y616 596 aa16.68■□□□□ 0.26
HOXA6-202ENST00000521478 CCDC194A0A1B0GVG4 234 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 MEIS3P2A8K0S8 358 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 DKC1O60832 514 aaKnown RBP eCLIP16.67■□□□□ 0.26
HOXA6-202ENST00000521478 P4HBP07237 508 aaKnown RBP16.67■□□□□ 0.26
HOXA6-202ENST00000521478 CTSAP10619 480 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 PTPN5P54829 565 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 NPEPPSP55786 919 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 GIT2Q14161 759 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 PPP4R3AQ6IN85 833 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 EXOC8Q8IYI6 725 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 NLRP4Q96MN2 994 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 POMKQ9H5K3 350 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 PPME1Q9Y570 386 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 COL4A3BPQ9Y5P4 624 aa16.67■□□□□ 0.26
HOXA6-202ENST00000521478 ZDBF2Q9HCK1 2354 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 GCFC2P16383 781 aaKnown RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 SP100P23497 879 aaPredicted RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 CA8P35219 290 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 MTHFRP42898 656 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 RNASELQ05823 741 aaKnown RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 MRPL10Q7Z7H8 261 aaKnown RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 NEK8Q86SG6 692 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 KMT2EQ8IZD2 1858 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 ZNF579Q8NAF0 562 aaKnown RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 SLC22A17Q8WUG5 538 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 BCL7CQ8WUZ0 217 aaPredicted RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 PRPF31Q8WWY3 499 aaKnown RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 AUTS2Q8WXX7 1259 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 PGBD4Q96DM1 585 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 CEP170P1Q96L14 293 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 RIPOR3Q96MK2 946 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 SLKQ9H2G2 1235 aaPredicted RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
HOXA6-202ENST00000521478 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 INPP5FQ9Y2H2 1132 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 PCDHB2Q9Y5E7 798 aa16.66■□□□□ 0.26
HOXA6-202ENST00000521478 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.65■□□□□ 0.26
HOXA6-202ENST00000521478 TBX3O15119 743 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 CDKL5O76039 1030 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 AVPR2P30518 371 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 RFC5P40937 340 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 SCRN1Q12765 414 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 TCF15Q12870 199 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 EPHA7Q15375 998 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 RARS2Q5T160 578 aaKnown RBP16.65■□□□□ 0.26
HOXA6-202ENST00000521478 AGMOQ6ZNB7 445 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 SRGAP1Q7Z6B7 1085 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 ZBTB33Q86T24 672 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 C4orf19Q8IY42 314 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 C12orf76Q8N812 135 aaPredicted RBP16.65■□□□□ 0.26
HOXA6-202ENST00000521478 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 KREMEN2Q8NCW0 462 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 HAS1Q92839 578 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 PHOX2BQ99453 314 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 DZANK1Q9NVP4 752 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 WRAP73Q9P2S5 460 aaPredicted RBP16.65■□□□□ 0.26
HOXA6-202ENST00000521478 DNAJB4Q9UDY4 337 aa16.65■□□□□ 0.26
HOXA6-202ENST00000521478 C2CD4DB7Z1M9 353 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 B4GALT3O60512 393 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 WEE2P0C1S8 567 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 SRGAP2CP0DJJ0 459 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 EPCAMP16422 314 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 XBP1P17861 261 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.25
HOXA6-202ENST00000521478 SLC11A1P49279 550 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 VCPP55072 806 aaKnown RBP16.64■□□□□ 0.25
HOXA6-202ENST00000521478 LAMTOR4Q0VGL1 99 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 ATAT1Q5SQI0 421 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 ZNF280BQ86YH2 543 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 PSPC1Q8WXF1 523 aaKnown RBP16.64■□□□□ 0.25
HOXA6-202ENST00000521478 TMEM143Q96AN5 459 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 NAP1L4Q99733 375 aaKnown RBP16.64■□□□□ 0.25
HOXA6-202ENST00000521478 VN1R3Q9BXE9 311 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 GBP3Q9H0R5 595 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 MINDY3Q9H8M7 445 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 KANSL3Q9P2N6 904 aa16.64■□□□□ 0.25
HOXA6-202ENST00000521478 SORCS3Q9UPU3 1222 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms