RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 LRRC43Q8N309 656 aa18.99■□□□□ 0.63
SQLE-205ENST00000521232 RNF149Q8NC42 400 aa18.99■□□□□ 0.63
SQLE-205ENST00000521232 RSPH1Q8WYR4 309 aa18.99■□□□□ 0.63
SQLE-205ENST00000521232 FAM105AQ9NUU6 356 aa18.99■□□□□ 0.63
SQLE-205ENST00000521232 KIF3AQ9Y496 699 aa18.99■□□□□ 0.63
SQLE-205ENST00000521232 A0A087WWV3 80 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 RPA1P27694 616 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 HOXA11P31270 313 aaPredicted RBP18.98■□□□□ 0.63
SQLE-205ENST00000521232 RAB27AP51159 221 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 PTENP60484 403 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 PCBP1Q15365 356 aaKnown RBP eCLIP18.98■□□□□ 0.639e-7■■□□□ 12.7
SQLE-205ENST00000521232 PUS10Q3MIT2 529 aaKnown RBP18.98■□□□□ 0.63
SQLE-205ENST00000521232 KCNT2Q6UVM3 1135 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 IFNLR1Q8IU57 520 aaPredicted RBP18.98■□□□□ 0.63
SQLE-205ENST00000521232 THNSL1Q8IYQ7 743 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 HELQQ8TDG4 1101 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 PPP2R3CQ969Q6 453 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 NACC1Q96RE7 527 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 CLDND1Q9NY35 253 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 DBR1Q9UK59 544 aaKnown RBP18.98■□□□□ 0.63
SQLE-205ENST00000521232 LZTS1Q9Y250 596 aa18.98■□□□□ 0.63
SQLE-205ENST00000521232 GRXCR2A6NFK2 248 aa18.97■□□□□ 0.63
SQLE-205ENST00000521232 H3BQ06 376 aaPredicted RBP18.97■□□□□ 0.63
SQLE-205ENST00000521232 FXR2P51116 673 aaKnown RBP eCLIP18.97■□□□□ 0.633e-9■■□□□ 12.9
SQLE-205ENST00000521232 ADAM15Q13444 863 aa18.97■□□□□ 0.63
SQLE-205ENST00000521232 TFDP1Q14186 410 aa18.97■□□□□ 0.63
SQLE-205ENST00000521232 ERMNQ8TAM6 284 aa18.97■□□□□ 0.63
SQLE-205ENST00000521232 CCDC43Q96MW1 224 aaKnown RBP18.97■□□□□ 0.63
SQLE-205ENST00000521232 MRPL9Q9BYD2 267 aaKnown RBP18.97■□□□□ 0.63
SQLE-205ENST00000521232 C5orf42Q9H799 3197 aa18.97■□□□□ 0.63
SQLE-205ENST00000521232 CSPG5O95196 566 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 MUTP22033 750 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 GTF2F1P35269 517 aaKnown RBP eCLIP18.96■□□□□ 0.633e-10■■■■■ 45.1
SQLE-205ENST00000521232 ERVFC1P60507 584 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 PDIA5Q14554 519 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 NBR1Q14596 966 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 PTCRAQ6ISU1 281 aaPredicted RBP18.96■□□□□ 0.63
SQLE-205ENST00000521232 PDE12Q6L8Q7 609 aaKnown RBP18.96■□□□□ 0.63
SQLE-205ENST00000521232 EP400NLQ6ZTU2 488 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 MRPL10Q7Z7H8 261 aaKnown RBP18.96■□□□□ 0.63
SQLE-205ENST00000521232 ADGRD2Q7Z7M1 963 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 ASAP3Q8TDY4 903 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
SQLE-205ENST00000521232 LPPQ93052 612 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 PGBD4Q96DM1 585 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 ZNF558Q96NG5 402 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 NFKBIZQ9BYH8 718 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 IGFLR1Q9H665 355 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 TLR9Q9NR96 1032 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 PUF60Q9UHX1 559 aaKnown RBP18.96■□□□□ 0.63
SQLE-205ENST00000521232 PCDHB6Q9Y5E3 794 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 PCDHB2Q9Y5E7 798 aa18.96■□□□□ 0.63
SQLE-205ENST00000521232 FSCN2O14926 492 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 OFD1O75665 1012 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 GLRA2P23416 452 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 AXLP30530 894 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 PPM1AP35813 382 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 DLX2Q07687 328 aaPredicted RBP18.95■□□□□ 0.62
SQLE-205ENST00000521232 PTGDRQ13258 359 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 CAPSQ13938 189 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 UBXN11Q5T124 520 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 MICAL1Q8TDZ2 1067 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 SPG21Q9NZD8 308 aa18.95■□□□□ 0.62
SQLE-205ENST00000521232 MEIS3P2A8K0S8 358 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 USO1O60763 962 aaKnown RBP18.94■□□□□ 0.62
SQLE-205ENST00000521232 IL9P15248 144 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 GJB2P29033 226 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 KRT17Q04695 432 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 LONRF3Q496Y0 759 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 HAUS3Q68CZ6 603 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 POTEGQ6S5H5 508 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 GLB1LQ6UWU2 654 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 AGMOQ6ZNB7 445 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 FAM178BQ8IXR5 827 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 EFHBQ8N7U6 833 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 IGSF22Q8N9C0 903 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 MCPH1Q8NEM0 835 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 LRWD1Q9UFC0 647 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 PCDHGC5Q9Y5F6 944 aa18.94■□□□□ 0.62
SQLE-205ENST00000521232 INO80B-WBP1J3KQ70 363 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 LAD1O00515 517 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 LINC01565O15544 149 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 TSPAN1O60635 241 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 ERLIN2O94905 339 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 PBX3P40426 434 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 NRIP1P48552 1158 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 ALDH7A1P49419 539 aaKnown RBP18.93■□□□□ 0.62
SQLE-205ENST00000521232 BCAR1P56945 870 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 MBTD1Q05BQ5 628 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 NCBP1Q09161 790 aaKnown RBP18.93■□□□□ 0.62
SQLE-205ENST00000521232 ECM1Q16610 540 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 AMHR2Q16671 573 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 NOMO2Q5JPE7 1267 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 RBM23Q86U06 439 aaKnown RBP18.93■□□□□ 0.62
SQLE-205ENST00000521232 SLC39A11Q8N1S5 342 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 CNNM3Q8NE01 707 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 CCDC51Q96ER9 411 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 POLR3FQ9H1D9 316 aaPredicted RBP18.93■□□□□ 0.62
SQLE-205ENST00000521232 TLE6Q9H808 572 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms