RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 SP100P23497 879 aaPredicted RBP22.73■■□□□ 1.23
PABPC1-217ENST00000521067 CATSPER4Q7RTX7 472 aa22.73■■□□□ 1.23
PABPC1-217ENST00000521067 NEK8Q86SG6 692 aa22.73■■□□□ 1.23
PABPC1-217ENST00000521067 AUTS2Q8WXX7 1259 aa22.73■■□□□ 1.23
PABPC1-217ENST00000521067 PBXIP1Q96AQ6 731 aa22.73■■□□□ 1.23
PABPC1-217ENST00000521067 INO80BQ9C086 356 aaPredicted RBP22.73■■□□□ 1.23
PABPC1-217ENST00000521067 MINDY3Q9H8M7 445 aa22.73■■□□□ 1.23
PABPC1-217ENST00000521067 TBC1D13Q9NVG8 400 aa22.73■■□□□ 1.23
PABPC1-217ENST00000521067 CCDC194A0A1B0GVG4 234 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 FAM205CA6NFA0 338 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 PFKFB2O60825 505 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 ZC3H11AO75152 810 aaKnown RBP eCLIP22.72■■□□□ 1.23
PABPC1-217ENST00000521067 GALTP07902 379 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 SRGAP2BP0DMP2 458 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 AFF1P51825 1210 aaKnown RBP22.72■■□□□ 1.23
PABPC1-217ENST00000521067 KANK3Q6NY19 840 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 PIK3AP1Q6ZUJ8 805 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 VPS52Q8N1B4 723 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 FEZF2Q8TBJ5 459 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 PRPF31Q8WWY3 499 aaKnown RBP22.72■■□□□ 1.23
PABPC1-217ENST00000521067 TMEM143Q96AN5 459 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 SLKQ9H2G2 1235 aaPredicted RBP22.72■■□□□ 1.23
PABPC1-217ENST00000521067 DHX33Q9H6R0 707 aaKnown RBP22.72■■□□□ 1.23
PABPC1-217ENST00000521067 RGL1Q9NZL6 768 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 DNAJB4Q9UDY4 337 aa22.72■■□□□ 1.23
PABPC1-217ENST00000521067 CCNT1O60563 726 aaKnown RBP22.71■■□□□ 1.23
PABPC1-217ENST00000521067 P4HBP07237 508 aaKnown RBP22.71■■□□□ 1.23
PABPC1-217ENST00000521067 HOXA11P31270 313 aaPredicted RBP22.71■■□□□ 1.23
PABPC1-217ENST00000521067 SPIRE1Q08AE8 756 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 NOMO2Q5JPE7 1267 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 ZNF280BQ86YH2 543 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 CASP10Q92851 521 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 ASIC4Q96FT7 647 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 TMEM169Q96HH4 297 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 IGSF21Q96ID5 467 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 CEP170P1Q96L14 293 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 VN1R3Q9BXE9 311 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 ZBP1Q9H171 429 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 BMP2KQ9NSY1 1161 aaPredicted RBP22.71■■□□□ 1.23
PABPC1-217ENST00000521067 INPP5FQ9Y2H2 1132 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 COL4A3BPQ9Y5P4 624 aa22.71■■□□□ 1.23
PABPC1-217ENST00000521067 SRGAP2CP0DJJ0 459 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 SKIP12755 728 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 FDPSP14324 419 aaKnown RBP22.7■■□□□ 1.22
PABPC1-217ENST00000521067 EPHA7Q15375 998 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 UBXN11Q5T124 520 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 GLB1LQ6UWU2 654 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 AGMOQ6ZNB7 445 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 POTEDQ86YR6 584 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 C12orf76Q8N812 135 aaPredicted RBP22.7■■□□□ 1.22
PABPC1-217ENST00000521067 JPH2Q9BR39 696 aaPredicted RBP22.7■■□□□ 1.22
PABPC1-217ENST00000521067 ADAM7Q9H2U9 754 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 POMKQ9H5K3 350 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 AGPAT5Q9NUQ2 364 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 PCDHB2Q9Y5E7 798 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 STK36Q9NRP7 1315 aa22.7■■□□□ 1.22
PABPC1-217ENST00000521067 CDKL5O76039 1030 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 WEE2P0C1S8 567 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 GCFC2P16383 781 aaKnown RBP22.69■■□□□ 1.22
PABPC1-217ENST00000521067 CA8P35219 290 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 SLC11A1P49279 550 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 MRE11P49959 708 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 SIGLEC14Q08ET2 396 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 LAMTOR4Q0VGL1 99 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 NR5A1Q13285 461 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 PTPN21Q16825 1174 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 MRPL10Q7Z7H8 261 aaKnown RBP22.69■■□□□ 1.22
PABPC1-217ENST00000521067 DDX53Q86TM3 631 aaKnown RBP22.69■■□□□ 1.22
PABPC1-217ENST00000521067 C4orf19Q8IY42 314 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 PRSS33Q8NF86 280 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 SLC7A3Q8WY07 619 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 DYDC2Q96IM9 177 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 LXNQ9BS40 222 aa22.69■■□□□ 1.22
PABPC1-217ENST00000521067 TBX3O15119 743 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 DDHD2O94830 711 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 CTSAP10619 480 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 EPCAMP16422 314 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 YWHABP31946 246 aaKnown RBP22.68■■□□□ 1.22
PABPC1-217ENST00000521067 POLGP54098 1239 aaPredicted RBP22.68■■□□□ 1.22
PABPC1-217ENST00000521067 CTTNQ14247 550 aaKnown RBP22.68■■□□□ 1.22
PABPC1-217ENST00000521067 TPRNQ4KMQ1 711 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 SLC22A17Q8WUG5 538 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 PHOX2BQ99453 314 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 GBP3Q9H0R5 595 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 ORC3Q9UBD5 711 aaPredicted RBP22.68■■□□□ 1.22
PABPC1-217ENST00000521067 IRAK3Q9Y616 596 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 USP34Q70CQ2 3546 aa22.68■■□□□ 1.22
PABPC1-217ENST00000521067 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.67■■□□□ 1.22
PABPC1-217ENST00000521067 RAB27AP51159 221 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 AK2P54819 239 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 CYP4A11Q02928 519 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 NCAPH2Q6IBW4 605 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 SRGAP1Q7Z6B7 1085 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 NECAB1Q8N987 351 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 PSPC1Q8WXF1 523 aaKnown RBP22.67■■□□□ 1.22
PABPC1-217ENST00000521067 RSPH1Q8WYR4 309 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 TNFRSF25Q93038 417 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 TSHZ2Q9NRE2 1034 aa22.67■■□□□ 1.22
PABPC1-217ENST00000521067 C2CD4DB7Z1M9 353 aa22.66■■□□□ 1.22
PABPC1-217ENST00000521067 DKC1O60832 514 aaKnown RBP eCLIP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms