RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 FAM205CA6NFA0 338 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 NT5C1B-RDH14C9J2C7 533 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 YWHABP31946 246 aaKnown RBP21.97■■□□□ 1.11
PABPC1-215ENST00000520804 KRT2P35908 639 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 RAB27AP51159 221 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 SPIRE1Q08AE8 756 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 NR5A1Q13285 461 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 LONRF3Q496Y0 759 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 NCAPH2Q6IBW4 605 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 LLGL2Q6P1M3 1020 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 SYCE2Q6PIF2 218 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 GLB1LQ6UWU2 654 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 SLFN12Q8IYM2 578 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 NECAB1Q8N987 351 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 PRPF31Q8WWY3 499 aaKnown RBP21.97■■□□□ 1.11
PABPC1-215ENST00000520804 PSPC1Q8WXF1 523 aaKnown RBP21.97■■□□□ 1.11
PABPC1-215ENST00000520804 EDAQ92838 391 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 TNFRSF25Q93038 417 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 TMEM143Q96AN5 459 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 AGPAT5Q9NUQ2 364 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 RGL1Q9NZL6 768 aa21.97■■□□□ 1.11
PABPC1-215ENST00000520804 C2orf71A6NGG8 1288 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 MEIS3P2A8K0S8 358 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 BAG4O95429 457 aaKnown RBP21.96■■□□□ 1.11
PABPC1-215ENST00000520804 HOXB8P17481 243 aaPredicted RBP21.96■■□□□ 1.11
PABPC1-215ENST00000520804 HOXD11P31277 338 aaPredicted RBP21.96■■□□□ 1.11
PABPC1-215ENST00000520804 ME3Q16798 604 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 HFE2Q6ZVN8 426 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 OTUD6AQ7L8S5 288 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 SRGAP1Q7Z6B7 1085 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 GTF3C6Q969F1 213 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 TMEM169Q96HH4 297 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 DYDC2Q96IM9 177 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 RPGRIP1Q96KN7 1286 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 ZSWIM4Q9H7M6 989 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 BRMS1Q9HCU9 246 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 TBC1D13Q9NVG8 400 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 PPP4R2Q9NY27 417 aa21.96■■□□□ 1.11
PABPC1-215ENST00000520804 CARNS1A5YM72 827 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 GAS2O43903 313 aaKnown RBP21.95■■□□□ 1.1
PABPC1-215ENST00000520804 ZC3H11AO75152 810 aaKnown RBP eCLIP21.95■■□□□ 1.1
PABPC1-215ENST00000520804 OFD1O75665 1012 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 LARGE1O95461 756 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 SRGAP2CP0DJJ0 459 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 LAMTOR4Q0VGL1 99 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 CTTNQ14247 550 aaKnown RBP21.95■■□□□ 1.1
PABPC1-215ENST00000520804 NOMO2Q5JPE7 1267 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 TMEM173Q86WV6 379 aaPredicted RBP21.95■■□□□ 1.1
PABPC1-215ENST00000520804 TCP11Q8WWU5 503 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 CASP10Q92851 521 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 PGBD4Q96DM1 585 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 NRDE2Q9H7Z3 1164 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 MINDY3Q9H8M7 445 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 BMP2KQ9NSY1 1161 aaPredicted RBP21.95■■□□□ 1.1
PABPC1-215ENST00000520804 INPP5FQ9Y2H2 1132 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 PCDHB2Q9Y5E7 798 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 HCFC2Q9Y5Z7 792 aa21.95■■□□□ 1.1
PABPC1-215ENST00000520804 CYP4A11Q02928 519 aa21.94■■□□□ 1.1
PABPC1-215ENST00000520804 BMS1Q14692 1282 aaKnown RBP21.94■■□□□ 1.1
PABPC1-215ENST00000520804 EMC2Q15006 297 aa21.94■■□□□ 1.1
PABPC1-215ENST00000520804 XKR9Q5GH70 373 aa21.94■■□□□ 1.1
PABPC1-215ENST00000520804 NSUN7Q8NE18 718 aaKnown RBP21.94■■□□□ 1.1
PABPC1-215ENST00000520804 APOL5Q9BWW9 433 aa21.94■■□□□ 1.1
PABPC1-215ENST00000520804 ARID2Q68CP9 1835 aa21.94■■□□□ 1.1
PABPC1-215ENST00000520804 ZBTB39O15060 712 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 ASAP2O43150 1006 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 CLASP2O75122 1294 aaKnown RBP21.93■■□□□ 1.1
PABPC1-215ENST00000520804 SLITRK3O94933 977 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 CXCL14O95715 111 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 GALTP07902 379 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 RNASELQ05823 741 aaKnown RBP21.93■■□□□ 1.1
PABPC1-215ENST00000520804 AGMOQ6ZNB7 445 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 MRPL10Q7Z7H8 261 aaKnown RBP21.93■■□□□ 1.1
PABPC1-215ENST00000520804 FERMT3Q86UX7 667 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 VPS52Q8N1B4 723 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 IGSF21Q96ID5 467 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 MFSD14AQ96MC6 490 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 ZBP1Q9H171 429 aa21.93■■□□□ 1.1
PABPC1-215ENST00000520804 HOXA11P31270 313 aaPredicted RBP21.92■■□□□ 1.1
PABPC1-215ENST00000520804 CA8P35219 290 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 ZXDAP98168 799 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 UBXN11Q5T124 520 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 TRIM67Q6ZTA4 783 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 DDX53Q86TM3 631 aaKnown RBP21.92■■□□□ 1.1
PABPC1-215ENST00000520804 TPH2Q8IWU9 490 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 RNF149Q8NC42 400 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 MTRQ99707 1265 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 EIF2AK1Q9BQI3 630 aaKnown RBP21.92■■□□□ 1.1
PABPC1-215ENST00000520804 KCNH6Q9H252 994 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 DNAJB4Q9UDY4 337 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 PCDHA12Q9UN75 941 aa21.92■■□□□ 1.1
PABPC1-215ENST00000520804 TECTAO75443 2155 aa21.91■■□□□ 1.1
PABPC1-215ENST00000520804 BTBD18B2RXH4 712 aa21.91■■□□□ 1.1
PABPC1-215ENST00000520804 CTSAP10619 480 aa21.91■■□□□ 1.1
PABPC1-215ENST00000520804 CALCRLQ16602 461 aa21.91■■□□□ 1.1
PABPC1-215ENST00000520804 TPRNQ4KMQ1 711 aa21.91■■□□□ 1.1
PABPC1-215ENST00000520804 BMP8AQ7Z5Y6 402 aa21.91■■□□□ 1.1
PABPC1-215ENST00000520804 URGCPQ8TCY9 931 aa21.91■■□□□ 1.1
PABPC1-215ENST00000520804 BCL7CQ8WUZ0 217 aaPredicted RBP21.91■■□□□ 1.1
PABPC1-215ENST00000520804 HSD17B14Q9BPX1 270 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms