RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 TTLL6Q8N841 843 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 MID2Q9UJV3 735 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 PDE5AO76074 875 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 CXCR5P32302 372 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 GDAP1Q8TB36 358 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 EPAS1Q99814 870 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 RPF1Q9H9Y2 349 aaKnown RBP12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 DIABLOQ9NR28 239 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 EIF2AK2P19525 551 aaKnown RBP12.9□□□□□ -0.35
ERGIC1-208ENST00000520399 CCND1P24385 295 aa12.9□□□□□ -0.35
ERGIC1-208ENST00000520399 MRPS15P82914 257 aaKnown RBP12.9□□□□□ -0.35
ERGIC1-208ENST00000520399 FOXO4P98177 505 aa12.9□□□□□ -0.35
ERGIC1-208ENST00000520399 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.35
ERGIC1-208ENST00000520399 NAF1Q96HR8 494 aaKnown RBP12.9□□□□□ -0.35
ERGIC1-208ENST00000520399 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.35
ERGIC1-208ENST00000520399 ATP6V0A4Q9HBG4 840 aa12.9□□□□□ -0.35
ERGIC1-208ENST00000520399 ECE2O60344 883 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ZMYND10O75800 440 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 GH2P01242 217 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 MMP14P50281 582 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 PLTPP55058 493 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ALX1Q15699 326 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 NCLNQ969V3 563 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ZFYVE19Q96K21 471 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 GCNAQ96QF7 691 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 MTA3Q9BTC8 594 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ZFYVE1Q9HBF4 777 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 PRKAG2Q9UGJ0 569 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 LRFN2Q9ULH4 789 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 DIS3Q9Y2L1 958 aaKnown RBP12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 UTYO14607 1347 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ACTN1P12814 892 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 TMED2Q15363 201 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 PDXDC2PQ6P474 469 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 MTBPQ96DY7 904 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ISCA1Q9BUE6 129 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 CEP72Q9P209 647 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 SYCE1LA8MT33 242 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 H0YC42 278 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 KRT7P08729 469 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ARL4AP40617 200 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 MSH2P43246 934 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 FNDC3AQ9Y2H6 1198 aaKnown RBP12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 SCYL3Q8IZE3 742 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ABI1Q8IZP0 508 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 ABHD8Q96I13 439 aa12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 NXF1Q9UBU9 619 aaKnown RBP12.89□□□□□ -0.35
ERGIC1-208ENST00000520399 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 MMP10P09238 476 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 PRDX5P30044 214 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 DYNLT1P63172 113 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 DMPKQ09013 629 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 OR6B2Q6IFH4 312 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 TMEM154Q6P9G4 183 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 ARHGEF18Q6ZSZ5 1173 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 SIKE1Q9BRV8 207 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 PDP2Q9P2J9 529 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 GDAQ9Y2T3 454 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 SUGT1Q9Y2Z0 365 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 FIS1Q9Y3D6 152 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 TARSL2A2RTX5 802 aaKnown RBP12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 DIAPH2O60879 1101 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 TSPAN9O75954 239 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 ATP1A3P13637 1013 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 DAB2P98082 770 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 DR1Q01658 176 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 ARHGEF6Q15052 776 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 HEXIM2Q96MH2 286 aaKnown RBP12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 SNX5Q9Y5X3 404 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 FAM200BP0CF97 657 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 CD58P19256 250 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 MED21Q13503 144 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 PROM2Q8N271 834 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 SNRNP27Q8WVK2 155 aaKnown RBP12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 CD209Q9NNX6 404 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 NMT2O60551 498 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 SERPINB3P29508 390 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 KLC3Q6P597 504 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 EEPD1Q7L9B9 569 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 TRIM74Q86UV6 250 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 TRIM73Q86UV7 250 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 DCP1AQ9NPI6 582 aaPredicted RBP12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 ABCB11O95342 1321 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 PRPSAP2O60256 369 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 TCF3P15923 654 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 OSTNP61366 133 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 MTMR1Q13613 665 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms