RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 ADGRL2O95490 1459 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 PRKAB2O43741 272 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 PDE8BO95263 885 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 HOXA13P31271 388 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-206ENST00000520002 YWHAHQ04917 246 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-206ENST00000520002 LRRC8EQ6NSJ5 796 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 FAM43BQ6ZT52 329 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-206ENST00000520002 TTI1O43156 1089 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 RCN1Q15293 331 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 UBE3CQ15386 1083 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 PTGISQ16647 500 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 GPATCH4Q5T3I0 446 aaKnown RBP9.25□□□□□ -0.93
CSMD1-206ENST00000520002 DDHD1Q8NEL9 900 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 PARVGQ9HBI0 331 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 USP21Q9UK80 565 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 ZNF18P17022 549 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 GFPT1Q06210 699 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-206ENST00000520002 PYROXD1Q8WU10 500 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 INPP5DQ92835 1189 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 MS4A14Q96JA4 679 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 SEPT3Q9UH03 358 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 CLRN2A0PK11 232 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 PPEF1O14829 653 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-206ENST00000520002 MED7O43513 233 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 PHKG2P15735 406 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 ARL4AP40617 200 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 DYNLL1P63167 89 aaKnown RBP9.25□□□□□ -0.93
CSMD1-206ENST00000520002 DPP9Q86TI2 863 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 ERP27Q96DN0 273 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 THAP9Q9H5L6 903 aa9.25□□□□□ -0.93
CSMD1-206ENST00000520002 USP15Q9Y4E8 981 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-206ENST00000520002 TARSL2A2RTX5 802 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 KRT7P08729 469 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 PSMA2P25787 234 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 HEXIM2Q96MH2 286 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 GOLPH3LQ9H4A5 285 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 KDM6BO15054 1643 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 LARGE1O95461 756 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 MTF1Q14872 753 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 LCORLQ8N3X6 602 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 H3BQF6 201 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 COPEO14579 308 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 ZBED1O96006 694 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 THOC5Q13769 683 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 CDH24Q86UP0 819 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 ARHGEF25Q86VW2 580 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 COA7Q96BR5 231 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 PPP1R14BQ96C90 147 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 EDEM3Q9BZQ6 932 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 COPRSQ9NQ92 184 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 PCP4L1A6NKN8 68 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 CDO1Q16878 200 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 DYNLL2Q96FJ2 89 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 COG4Q9H9E3 785 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 KCTD2Q14681 263 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 ZNF507Q8TCN5 953 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 NR1H4Q96RI1 486 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 DIABLOQ9NR28 239 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 AURKCQ9UQB9 309 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 ATP10AO60312 1499 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 PRR23D1E9PI22 279 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 APBA3O96018 575 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 USP17L8P0C7I0 530 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 PLA2G4BP0C869 781 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 PRR23D2P0DMB1 279 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 SCTRP47872 440 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 FSCBQ5H9T9 825 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 C7orf31Q8N865 590 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 SMARCAL1Q9NZC9 954 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 L3MBTL1Q9Y468 752 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 TARSP26639 723 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 ZBED6P86452 979 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 RFWD2Q8NHY2 731 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 AIFM3Q96NN9 605 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 MRPL47Q9HD33 250 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 SEMA3EO15041 775 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 KPNA2P52292 529 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 TRIM67Q6ZTA4 783 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 CDR2LQ86X02 465 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 CEP170P1Q96L14 293 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 RNPC3Q96LT9 517 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 GLE1Q53GS7 698 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 STAG2Q8N3U4 1231 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 LINC00301Q8NCQ3 95 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 DDX47Q9H0S4 455 aaKnown RBP9.24□□□□□ -0.93
CSMD1-206ENST00000520002 ABHD10Q9NUJ1 306 aa9.24□□□□□ -0.93
CSMD1-206ENST00000520002 USP17L3A6NCW0 530 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 USP17L4A6NCW7 530 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 BLVRAP53004 296 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 RWDD4Q6NW29 188 aaKnown RBP9.23□□□□□ -0.93
CSMD1-206ENST00000520002 SARM1Q6SZW1 724 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 USP17L1Q7RTZ2 530 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 OR2W6PQ8NHA6 318 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 PNMA2Q9UL42 364 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 BCS1LQ9Y276 419 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 ZFYVE16Q7Z3T8 1539 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 SFR1Q86XK3 245 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 RNF14Q9UBS8 474 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms