RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CTTNQ14247 550 aaKnown RBP28.28■■■□□ 2.12
VEGFA-220ENST00000519767 SAFBQ15424 915 aaKnown RBP eCLIP28.28■■■□□ 2.12
VEGFA-220ENST00000519767 DUSP6Q16828 381 aa28.28■■■□□ 2.12
VEGFA-220ENST00000519767 TMEM143Q96AN5 459 aa28.28■■■□□ 2.12
VEGFA-220ENST00000519767 HSD17B14Q9BPX1 270 aa28.28■■■□□ 2.12
VEGFA-220ENST00000519767 PER2O15055 1255 aa28.27■■■□□ 2.12
VEGFA-220ENST00000519767 GLB1LQ6UWU2 654 aa28.27■■■□□ 2.12
VEGFA-220ENST00000519767 SMRP1Q8NCR6 262 aa28.27■■■□□ 2.12
VEGFA-220ENST00000519767 PGBD4Q96DM1 585 aa28.27■■■□□ 2.12
VEGFA-220ENST00000519767 TCF25Q9BQ70 676 aa28.27■■■□□ 2.12
VEGFA-220ENST00000519767 EIF2AK1Q9BQI3 630 aaKnown RBP28.27■■■□□ 2.12
VEGFA-220ENST00000519767 TTC12Q9H892 705 aaPredicted RBP28.27■■■□□ 2.12
VEGFA-220ENST00000519767 FAM105AQ9NUU6 356 aa28.27■■■□□ 2.12
VEGFA-220ENST00000519767 KIAA1671Q9BY89 1806 aa28.27■■■□□ 2.12
VEGFA-220ENST00000519767 SRGAP2BP0DMP2 458 aa28.26■■■□□ 2.11
VEGFA-220ENST00000519767 CYP4A11Q02928 519 aa28.26■■■□□ 2.11
VEGFA-220ENST00000519767 MXD4Q14582 209 aaPredicted RBP28.26■■■□□ 2.11
VEGFA-220ENST00000519767 BMS1Q14692 1282 aaKnown RBP28.26■■■□□ 2.11
VEGFA-220ENST00000519767 EMC2Q15006 297 aa28.26■■■□□ 2.11
VEGFA-220ENST00000519767 PCBP1Q15365 356 aaKnown RBP eCLIP28.26■■■□□ 2.114e-7■■□□□ 11.7
VEGFA-220ENST00000519767 TMEM184AQ6ZMB5 413 aa28.26■■■□□ 2.11
VEGFA-220ENST00000519767 TMC7Q7Z402 723 aa28.26■■■□□ 2.11
VEGFA-220ENST00000519767 ENTPD7Q9NQZ7 604 aa28.26■■■□□ 2.11
VEGFA-220ENST00000519767 ANKEF1Q9NU02 776 aa28.26■■■□□ 2.11
VEGFA-220ENST00000519767 AGPAT5Q9NUQ2 364 aa28.26■■■□□ 2.11
VEGFA-220ENST00000519767 NEMFO60524 1076 aa28.25■■■□□ 2.11
VEGFA-220ENST00000519767 FERMT3Q86UX7 667 aa28.25■■■□□ 2.11
VEGFA-220ENST00000519767 SLC39A11Q8N1S5 342 aa28.25■■■□□ 2.11
VEGFA-220ENST00000519767 MTMR9Q96QG7 549 aa28.25■■■□□ 2.11
VEGFA-220ENST00000519767 LLPHQ9BRT6 129 aaKnown RBP28.25■■■□□ 2.11
VEGFA-220ENST00000519767 ZBTB39O15060 712 aa28.24■■■□□ 2.11
VEGFA-220ENST00000519767 DCXO43602 365 aa28.24■■■□□ 2.11
VEGFA-220ENST00000519767 GLP2RO95838 553 aa28.24■■■□□ 2.11
VEGFA-220ENST00000519767 XRCC6P12956 609 aaKnown RBP eCLIP28.24■■■□□ 2.111e-10■□□□□ 8.4
VEGFA-220ENST00000519767 TXKP42681 527 aa28.24■■■□□ 2.11
VEGFA-220ENST00000519767 MTRQ99707 1265 aa28.24■■■□□ 2.11
VEGFA-220ENST00000519767 BARX2Q9UMQ3 279 aaPredicted RBP28.24■■■□□ 2.11
VEGFA-220ENST00000519767 PCDHB2Q9Y5E7 798 aa28.24■■■□□ 2.11
VEGFA-220ENST00000519767 ATG2AQ2TAZ0 1938 aa28.24■■■□□ 2.11
VEGFA-220ENST00000519767 PBX3P40426 434 aa28.23■■■□□ 2.11
VEGFA-220ENST00000519767 BCAR1P56945 870 aa28.23■■■□□ 2.11
VEGFA-220ENST00000519767 POU5F1BQ06416 359 aa28.23■■■□□ 2.11
VEGFA-220ENST00000519767 NCBP1Q09161 790 aaKnown RBP28.23■■■□□ 2.11
VEGFA-220ENST00000519767 NOMO2Q5JPE7 1267 aa28.23■■■□□ 2.11
VEGFA-220ENST00000519767 PLPP4Q5VZY2 271 aa28.23■■■□□ 2.11
VEGFA-220ENST00000519767 MRPL10Q7Z7H8 261 aaKnown RBP28.23■■■□□ 2.11
VEGFA-220ENST00000519767 MRPL43Q8N983 215 aaKnown RBP28.23■■■□□ 2.11
VEGFA-220ENST00000519767 RNF149Q8NC42 400 aa28.23■■■□□ 2.11
VEGFA-220ENST00000519767 ZSCAN31Q96LW9 406 aaPredicted RBP28.23■■■□□ 2.11
VEGFA-220ENST00000519767 C11orf16Q9NQ32 467 aa28.23■■■□□ 2.11
VEGFA-220ENST00000519767 ARIH1Q9Y4X5 557 aaPredicted RBP28.23■■■□□ 2.11
VEGFA-220ENST00000519767 OFD1O75665 1012 aa28.22■■■□□ 2.11
VEGFA-220ENST00000519767 TFDP1Q14186 410 aa28.22■■■□□ 2.11
VEGFA-220ENST00000519767 SMC1AQ14683 1233 aaKnown RBP28.22■■■□□ 2.11
VEGFA-220ENST00000519767 LPPQ93052 612 aa28.22■■■□□ 2.11
VEGFA-220ENST00000519767 TMEM169Q96HH4 297 aa28.22■■■□□ 2.11
VEGFA-220ENST00000519767 C5orf42Q9H799 3197 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 PRR33A8MZF0 331 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 DGAT1O75907 488 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 HOXA11P31270 313 aaPredicted RBP28.21■■■□□ 2.11
VEGFA-220ENST00000519767 FOSBP53539 338 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 RNASELQ05823 741 aaKnown RBP28.21■■■□□ 2.11
VEGFA-220ENST00000519767 CNNM3Q8NE01 707 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 C8orf76Q96K31 380 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 MINDY3Q9H8M7 445 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 KANSL3Q9P2N6 904 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 PLXNA4Q9HCM2 1894 aa28.21■■■□□ 2.11
VEGFA-220ENST00000519767 HIDE1A8MVS5 230 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 HOXB8P17481 243 aaPredicted RBP28.2■■■□□ 2.1
VEGFA-220ENST00000519767 AXLP30530 894 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 ST3GAL1Q11201 340 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 KCNC3Q14003 757 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 URGCPQ8TCY9 931 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 CCDC43Q96MW1 224 aaKnown RBP28.2■■■□□ 2.1
VEGFA-220ENST00000519767 UBN1Q9NPG3 1134 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 BMP2KQ9NSY1 1161 aaPredicted RBP28.2■■■□□ 2.1
VEGFA-220ENST00000519767 TBC1D13Q9NVG8 400 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 RAPGEFL1Q9UHV5 662 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 HCN4Q9Y3Q4 1203 aa28.2■■■□□ 2.1
VEGFA-220ENST00000519767 USP15Q9Y4E8 981 aaPredicted RBP28.2■■■□□ 2.1
VEGFA-220ENST00000519767 CNTNAP2Q9UHC6 1331 aa28.19■■■□□ 2.1
VEGFA-220ENST00000519767 ZC3H11AO75152 810 aaKnown RBP eCLIP28.19■■■□□ 2.1
VEGFA-220ENST00000519767 PTENP60484 403 aa28.19■■■□□ 2.1
VEGFA-220ENST00000519767 ORC2Q13416 577 aaPredicted RBP28.19■■■□□ 2.1
VEGFA-220ENST00000519767 LONRF3Q496Y0 759 aa28.19■■■□□ 2.1
VEGFA-220ENST00000519767 VN1R2Q8NFZ6 395 aa28.19■■■□□ 2.1
VEGFA-220ENST00000519767 FOXP1Q9H334 677 aaPredicted RBP28.19■■■□□ 2.1
VEGFA-220ENST00000519767 XPNPEP1Q9NQW7 623 aa28.19■■■□□ 2.1
VEGFA-220ENST00000519767 STK39Q9UEW8 545 aa28.19■■■□□ 2.1
VEGFA-220ENST00000519767 FAM86C2PA6NEL3 165 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 C2orf71A6NGG8 1288 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 NT5C1B-RDH14C9J2C7 533 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 ERLIN2O94905 339 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 CXCL14O95715 111 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 MCM7P33993 719 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 HMGN5P82970 282 aaKnown RBP28.18■■■□□ 2.1
VEGFA-220ENST00000519767 GIT2Q14161 759 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 ANKRD54Q6NXT1 300 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 DDX53Q86TM3 631 aaKnown RBP28.18■■■□□ 2.1
VEGFA-220ENST00000519767 IFNLR1Q8IU57 520 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms