RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 HOMER2Q9NSB8 354 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 EID1Q9Y6B2 187 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 PHLDB1Q86UU1 1377 aa7.28□□□□□ -1.24
SQLE-203ENST00000518931 PCDH8O95206 1070 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 FOSP01100 380 aaPredicted RBP7.27□□□□□ -1.25
SQLE-203ENST00000518931 KRT18P05783 430 aaKnown RBP7.27□□□□□ -1.25
SQLE-203ENST00000518931 CLEC2LP0C7M8 214 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 MRE11P49959 708 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 HLTFQ14527 1009 aaKnown RBP eCLIP7.27□□□□□ -1.25
SQLE-203ENST00000518931 PDCD1Q15116 288 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 PPP2R5AQ15172 486 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 MAPRE1Q15691 268 aaKnown RBP7.27□□□□□ -1.25
SQLE-203ENST00000518931 EFCAB2Q5VUJ9 269 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 ARHGEF18Q6ZSZ5 1173 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 PLEKHH3Q7Z736 793 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 SPATS2Q86XZ4 545 aaKnown RBP7.27□□□□□ -1.25
SQLE-203ENST00000518931 DYDC2Q96IM9 177 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 PITHD1Q9GZP4 211 aaPredicted RBP7.27□□□□□ -1.25
SQLE-203ENST00000518931 CASS4Q9NQ75 786 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 DENND2AQ9ULE3 1009 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 FAM184BQ9ULE4 1060 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 SYNPO2Q9UMS6 1093 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 ZNF536O15090 1300 aa7.27□□□□□ -1.25
SQLE-203ENST00000518931 A0A0A6YYJ9 748 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 ST20-MTHFSA0A0A6YYL1 179 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 FGAP02671 866 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 CTSWP56202 376 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 FAM193AP78312 1265 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 SURF1Q15526 300 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 ZMAT1Q5H9K5 638 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 ICE2Q659A1 982 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 BMP8AQ7Z5Y6 402 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 WDR75Q8IWA0 830 aaKnown RBP7.26□□□□□ -1.25
SQLE-203ENST00000518931 CMIPQ8IY22 773 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 COG1Q8WTW3 980 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 RUNDC1Q96C34 613 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 NOL10Q9BSC4 688 aaKnown RBP7.26□□□□□ -1.25
SQLE-203ENST00000518931 ZHX3Q9H4I2 956 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 NRBP1Q9UHY1 535 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 USP18Q9UMW8 372 aa7.26□□□□□ -1.25
SQLE-203ENST00000518931 GOLGA8AA7E2F4 631 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 GOLGA8BA8MQT2 603 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 NPHP1O15259 732 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 OPHN1O60890 802 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 PRKD3O94806 890 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 MANFP55145 182 aaKnown RBP7.25□□□□□ -1.25
SQLE-203ENST00000518931 FAPQ12884 760 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 ADAM15Q13444 863 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 NFIXQ14938 502 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 TBR1Q16650 682 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 ZNF827Q17R98 1081 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 ZNF568Q3ZCX4 644 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 TBC1D10BQ4KMP7 808 aaPredicted RBP7.25□□□□□ -1.25
SQLE-203ENST00000518931 CT83Q5H943 113 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 ERICH6BQ5W0A0 696 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 CCDC62Q6P9F0 684 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 USP30Q70CQ3 517 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 PTPN18Q99952 460 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 SLC5A4Q9NY91 659 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 RTEL1Q9NZ71 1219 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 RAPGEFL1Q9UHV5 662 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 DNAI1Q9UI46 699 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 PPP2R3BQ9Y5P8 575 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 SLC4A7Q9Y6M7 1214 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 NUMBLQ9Y6R0 609 aa7.25□□□□□ -1.25
SQLE-203ENST00000518931 LAMTOR5O43504 91 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 H2AFYO75367 372 aaKnown RBP7.24□□□□□ -1.25
SQLE-203ENST00000518931 CNOT4O95628 575 aaKnown RBP7.24□□□□□ -1.25
SQLE-203ENST00000518931 MYL1P05976 194 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 PFKMP08237 780 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 SCAND1P57086 179 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 RAPGEF1Q13905 1077 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 RNF151Q2KHN1 245 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 AGBL4Q5VU57 503 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 PPP4R4Q6NUP7 873 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 KLHDC10Q6PID8 442 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 DRC7Q8IY82 874 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 AHCYL2Q96HN2 611 aaKnown RBP7.24□□□□□ -1.25
SQLE-203ENST00000518931 HIST1H2AHQ96KK5 128 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 HIST1H2AJQ99878 128 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 OR10A2Q9H208 303 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 VWA7Q9Y334 891 aa7.24□□□□□ -1.25
SQLE-203ENST00000518931 CDKN1CP49918 316 aaPredicted RBP7.23□□□□□ -1.25
SQLE-203ENST00000518931 SESN2P58004 480 aaPredicted RBP7.23□□□□□ -1.25
SQLE-203ENST00000518931 EXOSC10Q01780 885 aaKnown RBP7.23□□□□□ -1.25
SQLE-203ENST00000518931 CASC1Q6TDU7 716 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 C1orf131Q8NDD1 294 aaKnown RBP7.23□□□□□ -1.25
SQLE-203ENST00000518931 GAB3Q8WWW8 586 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 NKD2Q969F2 451 aaPredicted RBP7.23□□□□□ -1.25
SQLE-203ENST00000518931 GFM2Q969S9 779 aaKnown RBP7.23□□□□□ -1.25
SQLE-203ENST00000518931 EAF2Q96CJ1 260 aaPredicted RBP7.23□□□□□ -1.25
SQLE-203ENST00000518931 WDR92Q96MX6 357 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 HAPLN2Q9GZV7 340 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 ZNF700Q9H0M5 742 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 POLR3BQ9NW08 1133 aaPredicted RBP7.23□□□□□ -1.25
SQLE-203ENST00000518931 C14orf119Q9NWQ9 140 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 TMPRSS11EQ9UL52 423 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 FRMD4BQ9Y2L6 1034 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 NR2E1Q9Y466 385 aa7.23□□□□□ -1.25
SQLE-203ENST00000518931 PCDHB6Q9Y5E3 794 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms