RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 TWF2Q6IBS0 349 aaKnown RBP14.78□□□□□ -0.04
VEGFA-219ENST00000518824 BRAPQ7Z569 592 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 CDR2LQ86X02 465 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-219ENST00000518824 EXOC8Q8IYI6 725 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 HELQQ8TDG4 1101 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 SAMD11Q96NU1 681 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 RUSC1Q9BVN2 902 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 INO80BQ9C086 356 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-219ENST00000518824 TYW1Q9NV66 732 aaKnown RBP14.78□□□□□ -0.04
VEGFA-219ENST00000518824 TSPAN1O60635 241 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 ITGB1P05556 798 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 PBX3P40426 434 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 AFF1P51825 1210 aaKnown RBP14.77□□□□□ -0.05
VEGFA-219ENST00000518824 TFF2Q03403 129 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 MXD4Q14582 209 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-219ENST00000518824 PTPAQ15257 358 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 FOXD4L5Q5VV16 416 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-219ENST00000518824 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-219ENST00000518824 KLHL23Q8NBE8 558 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 FOXD4L4Q8WXT5 416 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-219ENST00000518824 KIFC3Q9BVG8 833 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 EIF2AQ9BY44 585 aaKnown RBP14.77□□□□□ -0.05
VEGFA-219ENST00000518824 CHST12Q9NRB3 414 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 FAM105AQ9NUU6 356 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 PCDHGC5Q9Y5F6 944 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 UNC80Q8N2C7 3258 aa14.77□□□□□ -0.05
VEGFA-219ENST00000518824 SPTBN5Q9NRC6 3674 aaKnown RBP14.76□□□□□ -0.05
VEGFA-219ENST00000518824 LRRIQ4A6NIV6 560 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 INO80B-WBP1J3KQ70 363 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 STX6O43752 255 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 B4GALT3O60512 393 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 EYA4O95677 639 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 PDCP20941 246 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 MUTP22033 750 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 MARCKSP29966 332 aaPredicted RBP14.76□□□□□ -0.05
VEGFA-219ENST00000518824 CEBPZQ03701 1054 aaKnown RBP14.76□□□□□ -0.05
VEGFA-219ENST00000518824 SPECC1Q5M775 1068 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 HYIQ5T013 277 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 KRT79Q5XKE5 535 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 ARL6IP4Q66PJ3 421 aaKnown RBP14.76□□□□□ -0.05
VEGFA-219ENST00000518824 AGMOQ6ZNB7 445 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 USP49Q70CQ1 688 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 HSCBQ8IWL3 235 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 DAW1Q8N136 415 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 SPPL3Q8TCT6 385 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 MRPL38Q96DV4 380 aaKnown RBP14.76□□□□□ -0.05
VEGFA-219ENST00000518824 TRAIPQ9BWF2 469 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 TMEM117Q9H0C3 514 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 DACT1Q9NYF0 836 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 PLAGL2Q9UPG8 496 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 PCDHB2Q9Y5E7 798 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 MYH15Q9Y2K3 1946 aa14.76□□□□□ -0.05
VEGFA-219ENST00000518824 RB1P06400 928 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 ARF4P18085 180 aaPredicted RBP14.75□□□□□ -0.05
VEGFA-219ENST00000518824 IRS1P35568 1242 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 POU5F1BQ06416 359 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 MAPK7Q13164 816 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 PKP1Q13835 747 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 TFDP1Q14186 410 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 SKIV2LQ15477 1246 aaKnown RBP14.75□□□□□ -0.05
VEGFA-219ENST00000518824 TMEM119Q4V9L6 283 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 SPOUT1Q5T280 376 aaKnown RBP14.75□□□□□ -0.05
VEGFA-219ENST00000518824 RINT1Q6NUQ1 792 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 COLGALT1Q8NBJ5 622 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 SMG8Q8ND04 991 aaKnown RBP14.75□□□□□ -0.05
VEGFA-219ENST00000518824 MCPH1Q8NEM0 835 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 USP28Q96RU2 1077 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 RAB34Q9BZG1 259 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 LMCD1Q9NZU5 365 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 HES2Q9Y543 173 aa14.75□□□□□ -0.05
VEGFA-219ENST00000518824 NPHP3-ACAD11A0A0J9YXS1 232 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 SFI1A8K8P3 1242 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 ZNF623O75123 536 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 OFD1O75665 1012 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 EOMESO95936 686 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 GTF2F1P35269 517 aaKnown RBP eCLIP14.74□□□□□ -0.053e-11■■■■■ 42.3
VEGFA-219ENST00000518824 RAD51AP2Q09MP3 1159 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 TCEAL5Q5H9L2 206 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 CDCA2Q69YH5 1023 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-219ENST00000518824 FAM43BQ6ZT52 329 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-219ENST00000518824 C1orf186Q6ZWK4 172 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 MRPL10Q7Z7H8 261 aaKnown RBP14.74□□□□□ -0.05
VEGFA-219ENST00000518824 CABP7Q86V35 215 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 CLIC6Q96NY7 704 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 C11orf84Q9BUA3 381 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-219ENST00000518824 NFKBIZQ9BYH8 718 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 FBXO2Q9UK22 296 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-219ENST00000518824 DNM3Q9UQ16 869 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 INPP5FQ9Y2H2 1132 aa14.74□□□□□ -0.05
VEGFA-219ENST00000518824 TCF20Q9UGU0 1960 aaKnown RBP14.73□□□□□ -0.05
VEGFA-219ENST00000518824 NT5C1B-RDH14C9J2C7 533 aa14.73□□□□□ -0.05
VEGFA-219ENST00000518824 HIP1RO75146 1068 aa14.73□□□□□ -0.05
VEGFA-219ENST00000518824 ERLIN2O94905 339 aa14.73□□□□□ -0.05
VEGFA-219ENST00000518824 SSBP05455 408 aaKnown RBP eCLIP14.73□□□□□ -0.05
VEGFA-219ENST00000518824 LIG1P18858 919 aa14.73□□□□□ -0.05
VEGFA-219ENST00000518824 SLC12A3P55017 1021 aa14.73□□□□□ -0.05
VEGFA-219ENST00000518824 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-219ENST00000518824 KARSQ15046 597 aaKnown RBP14.73□□□□□ -0.05
VEGFA-219ENST00000518824 ADGRD2Q7Z7M1 963 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms