RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 EPG5Q9HCE0 2579 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 PTPDC1A2A3K4 754 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 MBTPS2O43462 519 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 ATP9BO43861 1147 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 MMP20O60882 483 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 MICAL2O94851 1124 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 EYA4O95677 639 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 GH1P01241 217 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 PSAPP07602 524 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 ZFYP08048 801 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 SNHG28P0DPA3 235 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 CASTP20810 708 aaKnown RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 CALML3P27482 149 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 SLC16A2P36021 539 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 TDO2P48775 406 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 SETQ01105 290 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 HYAL1Q12794 435 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 IKQ13123 557 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 GPM6BQ13491 265 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 CAMK1Q14012 370 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 CBX2Q14781 532 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 PKN1Q16512 942 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 LY6KQ17RY6 165 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 ZNF648Q5T619 568 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 SYDE2Q5VT97 1194 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 RPAINQ86UA6 219 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 SERINC5Q86VE9 423 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 TMEM192Q8IY95 271 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 CHMP4CQ96CF2 233 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 MSLNLQ96KJ4 702 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 SEC62Q99442 399 aaKnown RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 ANP32EQ9BTT0 268 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 KCNF1Q9H3M0 494 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 RC3H2Q9HBD1 1191 aaKnown RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 ECHDC1Q9NTX5 307 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 ANAPC4Q9UJX5 808 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 STX8Q9UNK0 236 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 FAM50BQ9Y247 325 aa7.05□□□□□ -1.28
PABPC1-207ENST00000518716 MAFBQ9Y5Q3 323 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-207ENST00000518716 NCOR2Q9Y618 2525 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 EMSYQ7Z589 1322 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 KIAA1217Q5T5P2 1943 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 TMEM221A6NGB7 291 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 LOC730098B7Z3J9 87 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 PROB1E7EW31 1015 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 CCER2I3L3R5 266 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 M0R296 226 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 OPLAHO14841 1288 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 GRM6O15303 877 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 ORC4O43929 436 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 SMARCA5O60264 1052 aaPredicted RBP7.04□□□□□ -1.28
PABPC1-207ENST00000518716 HMMRO75330 724 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 TBX10O75333 385 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 AMHP03971 560 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 PRNPP04156 253 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 RB1P06400 928 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 PDHBP11177 359 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 JUNBP17275 347 aaPredicted RBP7.04□□□□□ -1.28
PABPC1-207ENST00000518716 ADAM15Q13444 863 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 SMAD4Q13485 552 aaKnown RBP7.04□□□□□ -1.28
PABPC1-207ENST00000518716 DGKDQ16760 1214 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 LCE5AQ5TCM9 118 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 PPTC7Q8NI37 304 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 TBC1D5Q92609 795 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 CLP1Q92989 425 aaKnown RBP7.04□□□□□ -1.28
PABPC1-207ENST00000518716 PRRX2Q99811 253 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 TMEM47Q9BQJ4 181 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 C16orf70Q9BSU1 422 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 TCP11L1Q9NUJ3 509 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 CLDND1Q9NY35 253 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 COL20A1Q9P218 1284 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 PNMA2Q9UL42 364 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 TTC3P53804 2025 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 KMT2EQ8IZD2 1858 aa7.04□□□□□ -1.28
PABPC1-207ENST00000518716 CEP250Q9BV73 2442 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 PLXNA3P51805 1871 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 RSPH10B2B2RC85 870 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 XYLBO75191 536 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 PPFIA4O75335 1185 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 APPP05067 770 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 RSPH10BP0C881 870 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 TOP1P11387 765 aaKnown RBP7.03□□□□□ -1.28
PABPC1-207ENST00000518716 GTF2F1P35269 517 aaKnown RBP eCLIP7.03□□□□□ -1.28
PABPC1-207ENST00000518716 BMPR1AP36894 532 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 PREPP48147 710 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 ZXDAP98168 799 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 GHRHRQ02643 423 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 ZNF543Q08ER8 600 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 ZNF124Q15973 351 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 KIAA0753Q2KHM9 967 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 MYOCDQ8IZQ8 938 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 CACTIN-AS1Q8N1I8 211 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 FBXL6Q8N531 539 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 C7orf31Q8N865 590 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 SYTL5Q8TDW5 730 aaPredicted RBP7.03□□□□□ -1.28
PABPC1-207ENST00000518716 FOXD4L4Q8WXT5 416 aaPredicted RBP7.03□□□□□ -1.28
PABPC1-207ENST00000518716 PBXIP1Q96AQ6 731 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 TAAR1Q96RJ0 339 aa7.03□□□□□ -1.28
PABPC1-207ENST00000518716 IWS1Q96ST2 819 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms