RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 GSTTP1A0A1W2PQM5 241 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 FAM86B1E9PN63 330 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 DDX39AO00148 427 aaKnown RBP6.9□□□□□ -1.3
MRPS28-203ENST00000518371 IPO5O00410 1097 aaKnown RBP6.9□□□□□ -1.3
MRPS28-203ENST00000518371 MARCH6O60337 910 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 B4GALT4O60513 344 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 TIMP1P01033 207 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 CD4P01730 458 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 FAM86B2P0C5J1 330 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 H2AFB1P0C5Y9 115 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 H2AFB2P0C5Z0 115 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 CYP2C9P11712 490 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 HOXD8P13378 290 aaPredicted RBP6.9□□□□□ -1.3
MRPS28-203ENST00000518371 CIITAP33076 1130 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 CYP2C18P33260 490 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 KRT2P35908 639 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 HMGN5P82970 282 aaKnown RBP6.9□□□□□ -1.3
MRPS28-203ENST00000518371 SETQ01105 290 aaPredicted RBP6.9□□□□□ -1.3
MRPS28-203ENST00000518371 DPYDQ12882 1025 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 GNL2Q13823 731 aaKnown RBP6.9□□□□□ -1.3
MRPS28-203ENST00000518371 PTGISQ16647 500 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 LETM2Q2VYF4 491 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 KRT40Q6A162 431 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 PIK3AP1Q6ZUJ8 805 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 TMEM199Q8N511 208 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 CRYGNQ8WXF5 182 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 C8orf76Q96K31 380 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 GDF15Q99988 308 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 ZNF577Q9BSK1 485 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 C16orf70Q9BSU1 422 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 HIPK3Q9H422 1215 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 SMARCAD1Q9H4L7 1026 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 VRTNQ9H8Y1 702 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 TBC1D22BQ9NU19 505 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 TRMT13Q9NUP7 481 aaKnown RBP6.9□□□□□ -1.3
MRPS28-203ENST00000518371 TBX21Q9UL17 535 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 TELO2Q9Y4R8 837 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 NFASCO94856 1347 aa6.9□□□□□ -1.3
MRPS28-203ENST00000518371 ARID1BQ8NFD5 2236 aaPredicted RBP6.9□□□□□ -1.3
MRPS28-203ENST00000518371 IGLV3-22A0A075B6J6 115 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 C17orf102A2RUQ5 167 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 BTBD18B2RXH4 712 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 HAS3O00219 553 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 PAX4O43316 350 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 F2P00734 622 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 ALBP02768 609 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 MMP1P03956 469 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 SMIM10L2AP0DMW4 78 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 SMIM10L2BP0DMW5 78 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 GNAT1P11488 350 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 ALAS2P22557 587 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 ITGB8P26012 769 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 BMP8BP34820 402 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 STAT5BP51692 787 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 CCL23P55773 120 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 ACTR2P61160 394 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 GUCY1B3Q02153 619 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 FPGSQ05932 587 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 ST3GAL1Q11201 340 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 ITGB3BPQ13352 177 aaPredicted RBP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 PPIGQ13427 754 aaKnown RBP eCLIP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 BFSP2Q13515 415 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 NPY5RQ15761 445 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 HABP4Q5JVS0 413 aaKnown RBP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 FAM160B1Q5W0V3 765 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 GDF6Q6KF10 455 aaPredicted RBP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 MFSD5Q6N075 450 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 MIS18BP1Q6P0N0 1132 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 NEK8Q86SG6 692 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 SESTD1Q86VW0 696 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 ANKMY2Q8IV38 441 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 DIS3L2Q8IYB7 885 aaKnown RBP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 TNPO1Q92973 898 aaKnown RBP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 TMX3Q96JJ7 454 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 NAP1L4Q99733 375 aaKnown RBP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 NOC4LQ9BVI4 516 aaKnown RBP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 RNPEPQ9H4A4 650 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 ERAP1Q9NZ08 941 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 DDX25Q9UHL0 483 aaKnown RBP6.89□□□□□ -1.31
MRPS28-203ENST00000518371 GTF2IRD1Q9UHL9 959 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 KIF3AQ9Y496 699 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 SAMM50Q9Y512 469 aa6.89□□□□□ -1.31
MRPS28-203ENST00000518371 CEP290O15078 2479 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 CYP3A7-CYP3A51PA0A087WV96 503 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 A0A1W2PPC1 479 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 M0R082 166 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 MSH4O15457 936 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 DHX15O43143 795 aaKnown RBP6.88□□□□□ -1.31
MRPS28-203ENST00000518371 CCNT1O60563 726 aaKnown RBP6.88□□□□□ -1.31
MRPS28-203ENST00000518371 GAS7O60861 476 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 BAG4O95429 457 aaKnown RBP6.88□□□□□ -1.31
MRPS28-203ENST00000518371 TDP2O95551 362 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 PSAPP07602 524 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 CSF2RAP15509 400 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 GCFC2P16383 781 aaKnown RBP6.88□□□□□ -1.31
MRPS28-203ENST00000518371 ATP2B1P20020 1258 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 CYP3A7P24462 503 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 MARK3P27448 753 aa6.88□□□□□ -1.31
MRPS28-203ENST00000518371 ZNF200P98182 395 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms