RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ZNF668Q96K58 619 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 LRRC2Q9BYS8 371 aa12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 DISC1Q9NRI5 854 aa12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 MRPL17Q9NRX2 175 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 FAM105AQ9NUU6 356 aa12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 EPS15L1Q9UBC2 864 aa12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 PIN4Q9Y237 131 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 SSX2IPQ9Y2D8 614 aa12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 R4GN57 208 aa12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 KMT2BQ9UMN6 2715 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-203ENST00000517667 OTOGLQ3ZCN5 2332 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 CLUHO75153 1309 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 ESYT2A0FGR8 921 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 KRBA1A5PL33 1030 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 SLC27A2O14975 620 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 ZBTB43O43298 467 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 NARSO43776 548 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 ZNF862O60290 1169 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 ZNF623O75123 536 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 CNPP09543 421 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 SFNP31947 248 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 GBP2P32456 591 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 PRR16Q569H4 304 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 LPPQ93052 612 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 BORCS6Q96GS4 357 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 VN1R3Q9BXE9 311 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 TBC1D17Q9HA65 648 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 C6orf50Q9HD87 102 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 MAN1C1Q9NR34 630 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
TRAPPC9-203ENST00000517667 CACNA1BQ00975 2339 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 MIA3Q5JRA6 1907 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 OFD1O75665 1012 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 URODP06132 367 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 ADH1AP07327 375 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 SLC11A1P49279 550 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 JAK3P52333 1124 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 PFKFB3Q16875 520 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 SLC44A3Q8N4M1 653 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 FEZF2Q8TBJ5 459 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 FAM193BQ96PV7 902 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 TMEM175Q9BSA9 504 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 ZMYND12Q9H0C1 365 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 DLL3Q9NYJ7 618 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 KANSL3Q9P2N6 904 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 CA14Q9ULX7 337 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 SIT1Q9Y3P8 196 aa12.9□□□□□ -0.34
TRAPPC9-203ENST00000517667 CNTNAP2Q9UHC6 1331 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 DOCK8Q8NF50 2099 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 CCDC195A0A1B0GUA6 201 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 LILRB3O75022 631 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 N4BP1O75113 896 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 GLUD1P00367 558 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 SOD2P04179 222 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 ALDH2P05091 517 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 SSBP05455 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 SDHBP21912 280 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 GNA11P29992 359 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 CIITAP33076 1130 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 RCAN1P53805 252 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 COL9A3Q14050 684 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 TARBP2Q15633 366 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 LONRF3Q496Y0 759 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 RNF20Q5VTR2 975 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 CATSPER4Q7RTX7 472 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 C1orf210Q8IVY1 113 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 EXOC6Q8TAG9 804 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 BICD2Q8TD16 824 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 HDAC7Q8WUI4 952 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 RIT2Q99578 217 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 ARHGEF3Q9NR81 526 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.354e-6■■■■□ 21.4
TRAPPC9-203ENST00000517667 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 MTCL1Q9Y4B5 1905 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-203ENST00000517667 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 A0A087WZ62 844 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 IGKV6-21A0A0C4DH24 114 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 GOLGA8AA7E2F4 631 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 MEIS3P2A8K0S8 358 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 GOLGA8BA8MQT2 603 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 INPPL1O15357 1258 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 GAS7O60861 476 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 C1RP00736 705 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 SP9P0CG40 484 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 AK2P54819 239 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 DRP2Q13474 957 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 NECTIN1Q15223 517 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 UGCGQ16739 394 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 XKR3Q5GH77 459 aa12.88□□□□□ -0.35
TRAPPC9-203ENST00000517667 ZNF280BQ86YH2 543 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms