RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 NUBP1P53384 320 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 GIT2Q14161 759 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 PLA2G4FQ68DD2 849 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 ASTLQ6HA08 431 aaPredicted RBP17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 ZNF410Q86VK4 478 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 ZDHHC14Q8IZN3 488 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 PLCD3Q8N3E9 789 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 FLCNQ8NFG4 579 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 FEZF2Q8TBJ5 459 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 NIFKQ9BYG3 293 aaKnown RBP17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 NID2Q14112 1375 aa17.1■□□□□ 0.33
CSGALNACT1-204ENST00000517494 RPS6KB1P23443 525 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 KLRC2P26717 231 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 RAB27AP51159 221 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 PTPN14Q15678 1187 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 NTRK3Q16288 839 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CCDC149Q6ZUS6 474 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 TRIM22Q8IYM9 498 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SLC22A17Q8WUG5 538 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 ACSF2Q96CM8 615 aaPredicted RBP17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 EMILIN2Q9BXX0 1053 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 SFXN1Q9H9B4 322 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CACNA1HO95180 2353 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CFAP54Q96N23 3096 aa17.09■□□□□ 0.33
CSGALNACT1-204ENST00000517494 CARNS1A5YM72 827 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 MAFO75444 373 aaPredicted RBP17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 OFD1O75665 1012 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 IFNAR1P17181 557 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 Q4G0T1 1027 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 ASCL5Q7RTU5 278 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 ZNF280BQ86YH2 543 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 RSPH1Q8WYR4 309 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PGBD4Q96DM1 585 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 C22orf23Q9BZE7 217 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 SLKQ9H2G2 1235 aaPredicted RBP17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PCDHA4Q9UN74 947 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 USTQ9Y2C2 406 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PCDHB2Q9Y5E7 798 aa17.08■□□□□ 0.32
CSGALNACT1-204ENST00000517494 IGKV6-21A0A0C4DH24 114 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 C2CD2LO14523 706 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 B4GALT3O60512 393 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 STBD1O95210 358 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PDIA3P30101 505 aaKnown RBP17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 HSPA4P34932 840 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PSMC5P62195 406 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 SSRP1Q08945 709 aaKnown RBP17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 CENPQQ7L2Z9 268 aaPredicted RBP17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 OTOP3Q7RTS5 596 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 CEP89Q96ST8 783 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 JPH2Q9BR39 696 aaPredicted RBP17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 TRAIPQ9BWF2 469 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 SH3GLB2Q9NR46 395 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 DDX25Q9UHL0 483 aaKnown RBP17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 FBXL21Q9UKT6 434 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 COL4A3BPQ9Y5P4 624 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 IRAK3Q9Y616 596 aa17.07■□□□□ 0.32
CSGALNACT1-204ENST00000517494 CPLX1O14810 134 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 POMCP01189 267 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 SRGAP2CP0DJJ0 459 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 MYBP10242 640 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PSMA5P28066 241 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 NPEPPSP55786 919 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 ANO5Q75V66 913 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 FRMD5Q7Z6J6 570 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 GPR149Q86SP6 731 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 BLIDQ8IZY5 108 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 SLC7A3Q8WY07 619 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 KCNB2Q92953 911 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 KLHL5Q96PQ7 755 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 AGPAT5Q9NUQ2 364 aa17.06■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PRR23AA6NEV1 266 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 ZNF623O75123 536 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 DDHD2O94830 711 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 CNPP09543 421 aaKnown RBP17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 CLCN4P51793 760 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 AFF1P51825 1210 aaKnown RBP17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 AK2P54819 239 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 NONOQ15233 471 aaKnown RBP eCLIP17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 INF2Q27J81 1249 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 LETM2Q2VYF4 491 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 AGMOQ6ZNB7 445 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 ETNPPLQ8TBG4 499 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 TMEM143Q96AN5 459 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 CEP170P1Q96L14 293 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 IFT122Q9HBG6 1241 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 MRPL17Q9NRX2 175 aaKnown RBP17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 FAN1Q9Y2M0 1017 aa17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PRG3Q9Y2Y8 225 aaPredicted RBP17.05■□□□□ 0.32
CSGALNACT1-204ENST00000517494 CYP3A7-CYP3A51PA0A087WV96 503 aa17.04■□□□□ 0.32
CSGALNACT1-204ENST00000517494 PROB1E7EW31 1015 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms