RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 NRCAMQ92823 1304 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 GOLGA8IPA6NC78 632 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 GOLGA8JA6NMD2 632 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 EIF3DO15371 548 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRPS1-206ENST00000517323 SERPINC1P01008 464 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 CYP2C9P11712 490 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 ADAM17P78536 824 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 KRT31Q15323 416 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 UVSSAQ2YD98 709 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 SPC24Q8NBT2 197 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 SPIRE2Q8WWL2 714 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 FAM84AQ96KN4 292 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
TRPS1-206ENST00000517323 CTAGE1Q96RT6 745 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 NTPCRQ9BSD7 190 aaKnown RBP17.04■□□□□ 0.32
TRPS1-206ENST00000517323 IFT122Q9HBG6 1241 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 AGPAT3Q9NRZ7 376 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 BICDL2A1A5D9 508 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 TEX33O43247 280 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 NR3C1P04150 777 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 ADSSP30520 456 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 NAMPTP43490 491 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 PRMT2P55345 433 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 NLRP11P59045 1033 aaKnown RBP17.03■□□□□ 0.32
TRPS1-206ENST00000517323 ADAM9Q13443 819 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 SEZ6Q53EL9 994 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 TCP11X2Q5H9J9 407 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 CEP135Q66GS9 1140 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 RNF180Q86T96 592 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 RETREG2Q8NC44 543 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 HAPLN2Q9GZV7 340 aa17.03■□□□□ 0.32
TRPS1-206ENST00000517323 TRMT13Q9NUP7 481 aaKnown RBP17.03■□□□□ 0.32
TRPS1-206ENST00000517323 C17orf102A2RUQ5 167 aa17.02■□□□□ 0.32
TRPS1-206ENST00000517323 AKAP3O75969 853 aa17.02■□□□□ 0.32
TRPS1-206ENST00000517323 CCDC155Q8N6L0 562 aa17.02■□□□□ 0.32
TRPS1-206ENST00000517323 SAAL1Q96ER3 474 aa17.02■□□□□ 0.32
TRPS1-206ENST00000517323 BICD1Q96G01 975 aa17.02■□□□□ 0.32
TRPS1-206ENST00000517323 TARS2Q9BW92 718 aaKnown RBP17.02■□□□□ 0.32
TRPS1-206ENST00000517323 OSBPL7Q9BZF2 842 aa17.02■□□□□ 0.32
TRPS1-206ENST00000517323 GBP3Q9H0R5 595 aa17.02■□□□□ 0.32
TRPS1-206ENST00000517323 TYW1Q9NV66 732 aaKnown RBP17.02■□□□□ 0.32
TRPS1-206ENST00000517323 COL1A2P08123 1366 aa17.02■□□□□ 0.32
TRPS1-206ENST00000517323 INO80B-WBP1J3KQ70 363 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 HNRNPDLO14979 420 aaKnown RBP17.02■□□□□ 0.31
TRPS1-206ENST00000517323 HARSP12081 509 aaKnown RBP17.02■□□□□ 0.31
TRPS1-206ENST00000517323 ZNF75DP51815 510 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 RTP1P59025 263 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 LRRC63Q05C16 580 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 NLRP7Q8WX94 980 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 SCLT1Q96NL6 688 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 ACCSQ96QU6 501 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 TSG101Q99816 390 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 INO80BQ9C086 356 aaPredicted RBP17.02■□□□□ 0.31
TRPS1-206ENST00000517323 ANKFY1Q9P2R3 1169 aa17.02■□□□□ 0.31
TRPS1-206ENST00000517323 MBLAC1A4D2B0 266 aaPredicted RBP17.01■□□□□ 0.31
TRPS1-206ENST00000517323 K7ERI5 159 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 PES1O00541 588 aaKnown RBP17.01■□□□□ 0.31
TRPS1-206ENST00000517323 CTSHP09668 335 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 DNM2P50570 870 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 MAP4K3Q8IVH8 894 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 TMEM40Q8WWA1 233 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 TCP11Q8WWU5 503 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 OSMRQ99650 979 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 KATNAL1Q9BW62 490 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 C17orf75Q9HAS0 396 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 PAK6Q9NQU5 681 aaPredicted RBP17.01■□□□□ 0.31
TRPS1-206ENST00000517323 GTF2IRD1Q9UHL9 959 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 TRAF3IP3Q9Y228 551 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 A0A1W2PQ45 241 aaPredicted RBP17.01■□□□□ 0.31
TRPS1-206ENST00000517323 A0A1W2PQY0 241 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 PDXKO00764 312 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 MAGEB2O15479 319 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 UBASH3AP57075 661 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 CT47A1Q5JQC4 288 aaPredicted RBP17.01■□□□□ 0.31
TRPS1-206ENST00000517323 ZBTB41Q5SVQ8 909 aa17.01■□□□□ 0.31
TRPS1-206ENST00000517323 CTU1Q7Z7A3 348 aaKnown RBP17.01■□□□□ 0.31
TRPS1-206ENST00000517323 CST5P28325 142 aaPredicted RBP17■□□□□ 0.31
TRPS1-206ENST00000517323 GPC3P51654 580 aa17■□□□□ 0.31
TRPS1-206ENST00000517323 TPM4P67936 248 aa17■□□□□ 0.31
TRPS1-206ENST00000517323 NKX3-2P78367 333 aa17■□□□□ 0.31
TRPS1-206ENST00000517323 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
TRPS1-206ENST00000517323 ITGA7Q13683 1181 aa17■□□□□ 0.31
TRPS1-206ENST00000517323 MXD4Q14582 209 aaPredicted RBP17■□□□□ 0.31
TRPS1-206ENST00000517323 CPB2Q96IY4 423 aa17■□□□□ 0.31
TRPS1-206ENST00000517323 CCDC113Q9H0I3 377 aa17■□□□□ 0.31
TRPS1-206ENST00000517323 TRPV6Q9H1D0 765 aa17■□□□□ 0.31
TRPS1-206ENST00000517323 ST6GALNAC4Q9H4F1 302 aa17■□□□□ 0.31
TRPS1-206ENST00000517323 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 ZEB2O60315 1214 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 MSCO60682 206 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 PRKCSHP14314 528 aaPredicted RBP16.99■□□□□ 0.31
TRPS1-206ENST00000517323 MBTD1Q05BQ5 628 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 PPP2R5AQ15172 486 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 STXBP4Q6ZWJ1 553 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 ZBTB33Q86T24 672 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 THAP9Q9H5L6 903 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 CALUO43852 315 aaPredicted RBP16.99■□□□□ 0.31
TRPS1-206ENST00000517323 GPR32O75388 356 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 TMOD1P28289 359 aa16.99■□□□□ 0.31
TRPS1-206ENST00000517323 HOXC8P31273 242 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms