RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PHC3Q8NDX5 983 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 ADCY4Q8NFM4 1077 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 FBXO27Q8NI29 283 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 TMC1Q8TDI8 760 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 TMEM169Q96HH4 297 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 CITED4Q96RK1 184 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 SLC9A7Q96T83 725 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 SLC6A15Q9H2J7 730 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 SMURF1Q9HCE7 757 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 FAM86C1Q9NVL1 165 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 MRPS18AQ9NVS2 196 aaKnown RBP0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 TIMELESSQ9UNS1 1208 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 MTO1Q9Y2Z2 717 aaKnown RBP0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 TELO2Q9Y4R8 837 aa0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 TIMM13Q9Y5L4 95 aaPredicted RBP0.33□□□□□ -2.36
RNU6-539P-201ENST00000516665 TRIP12Q14669 1992 aaPredicted RBP0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 KMT2DO14686 5537 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 A0A0G2JNJ9 132 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 ACOT7O00154 380 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 ARNTLO00327 626 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 MYO1BO43795 1136 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 ATG7O95352 703 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 CYP2D6P10635 497 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 ITGA4P13612 1032 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 NME1P15531 152 aaKnown RBP0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 ZSCAN20P17040 1043 aaPredicted RBP0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 ARHGAP25P42331 645 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 BPIFB4P59827 614 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 HTRA4P83105 476 aaPredicted RBP0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 MLECQ14165 292 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 DDB1Q16531 1140 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 FAM214AQ32MH5 1076 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 SYNPOQ8N3V7 929 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 FAM8A1Q9UBU6 413 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 Q9UFV3 132 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
RNU6-539P-201ENST00000516665 MUC16Q8WXI7 14507 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 A0A087WZG4 1122 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 CBFA2T2O43439 604 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 CRYABP02511 175 aaKnown RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 TP53P04637 393 aaPredicted RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 TNFRSF8P28908 595 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 COMPP49747 757 aaPredicted RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 RPL36AP83881 106 aaKnown RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 CD83Q01151 205 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 TUSC3Q13454 348 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 STILQ15468 1287 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 SLC1A5Q15758 541 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 ENOX2Q16206 610 aaKnown RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 TRIM71Q2Q1W2 868 aaKnown RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 PDCD4Q53EL6 469 aaKnown RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 ZNF549Q6P9A3 640 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 HAPLN4Q86UW8 402 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 CCDC103Q8IW40 242 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 TRIM48Q8IWZ4 208 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 BCL6BQ8N143 479 aaPredicted RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 COPS5Q92905 334 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 ARL8AQ96BM9 186 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 DCLRE1CQ96SD1 692 aaKnown RBP0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 C12orf49Q9H741 205 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 PLSCR4Q9NRQ2 329 aa0.31□□□□□ -2.36
RNU6-539P-201ENST00000516665 SCN5AQ14524 2016 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 LY6G6EA0A0G2JKS1 128 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 C2orf78A6NCI8 922 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 GOLGA8BA8MQT2 603 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 F6X3S4 739 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 ICMTO60725 284 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 DGKIO75912 1065 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 ATE1O95260 518 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 TOMM40O96008 361 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 ELFN1P0C7U0 828 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 SSFA2P28290 1259 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 PMS1P54277 932 aaKnown RBP0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 TWIST1Q15672 202 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 CXXC5Q7LFL8 322 aaKnown RBP0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 APBB1IPQ7Z5R6 666 aaPredicted RBP0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 PELI3Q8N2H9 469 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 OR52N2Q8NGI0 321 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 DMRTB1Q96MA1 342 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 RCAN3Q9UKA8 241 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 PCDHB14Q9Y5E9 798 aa0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 RBM8AQ9Y5S9 174 aaKnown RBP0.3□□□□□ -2.36
RNU6-539P-201ENST00000516665 SMIM35A0A1B0GVV1 85 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 ZBTB7CA1YPR0 619 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 H3BNX3 289 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 FOSP01100 380 aaPredicted RBP0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 HLA-DOAP06340 250 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 GM2AP17900 193 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 ZNF10P21506 573 aaPredicted RBP0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 AMPD2Q01433 879 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 CAMK2GQ13555 558 aaPredicted RBP0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 MOGSQ13724 837 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 KANK2Q63ZY3 851 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 CYP4F22Q6NT55 531 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 MRPL10Q7Z7H8 261 aaKnown RBP0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 CNGA4Q8IV77 575 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 PIP4K2CQ8TBX8 421 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 SLC7A6OSQ96CW6 309 aaPredicted RBP0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 ZNF479Q96JC4 524 aa0.29□□□□□ -2.36
RNU6-539P-201ENST00000516665 AIFM2Q9BRQ8 373 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms