RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 FBXO10Q9UK96 956 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 TIMM13Q9Y5L4 95 aaPredicted RBP0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 MUC5ACP98088 5654 aa0.18□□□□□ -2.38
RNU6-542P-201ENST00000516405 MUC16Q8WXI7 14507 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 A0A0G2JNJ9 132 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 C2orf78A6NCI8 922 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 ELFN1P0C7U0 828 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 CYP2D6P10635 497 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 NME1P15531 152 aaKnown RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 CERS1P27544 350 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 RNASE9P60153 205 aaKnown RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 RPL11P62913 178 aaKnown RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 SRPK2P78362 688 aaKnown RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 PLCB2Q00722 1185 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 STILQ15468 1287 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 TRIM71Q2Q1W2 868 aaKnown RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 Q4G0T1 1027 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 PDCD4Q53EL6 469 aaKnown RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 TSTD2Q5T7W7 516 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZNF324BQ6AW86 544 aaPredicted RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZNF449Q6P9G9 518 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 CXXC5Q7LFL8 322 aaKnown RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 OTOP2Q7RTS6 562 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 PLXDC1Q8IUK5 500 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 SYT12Q8IV01 421 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 TRIM48Q8IWZ4 208 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 PELI3Q8N2H9 469 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 NANOGP1Q8N7R0 232 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 FBXO27Q8NI29 283 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 COPS5Q92905 334 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 CITED4Q96RK1 184 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 DCLRE1CQ96SD1 692 aaKnown RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 HEPHQ9BQS7 1158 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 GFRA4Q9GZZ7 299 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 Q9UFV3 132 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 TIMELESSQ9UNS1 1208 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 COA3Q9Y2R0 106 aaPredicted RBP0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 WNT6Q9Y6F9 365 aa0.17□□□□□ -2.38
RNU6-542P-201ENST00000516405 A0A087WZG4 1122 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZBTB7CA1YPR0 619 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 FAM86C2PA6NEL3 165 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 ABLIM3O94929 683 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 ATE1O95260 518 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 TOMM40O96008 361 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 ABL1P00519 1130 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 ITGA4P13612 1032 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 GNAT2P19087 354 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 BPIFB4P59827 614 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 TRA2BP62995 288 aaKnown RBP0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 RBM10P98175 930 aaKnown RBP0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 CD83Q01151 205 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 TUSC3Q13454 348 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 MLECQ14165 292 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 TRIP6Q15654 476 aaKnown RBP0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 REC114Q7Z4M0 266 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 APBB1IPQ7Z5R6 666 aaPredicted RBP0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 KRT77Q7Z794 578 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 CCDC103Q8IW40 242 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 SYNPOQ8N3V7 929 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 PHC3Q8NDX5 983 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 ADCY4Q8NFM4 1077 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 OR52N2Q8NGI0 321 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 TMC1Q8TDI8 760 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 WNK4Q96J92 1243 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 FAM86C1Q9NVL1 165 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 MRPS18AQ9NVS2 196 aaKnown RBP0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 TRNAU1APQ9NX07 287 aaKnown RBP0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 MDN1Q9NU22 5596 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 HIVEP2P31629 2446 aa0.16□□□□□ -2.38
RNU6-542P-201ENST00000516405 CACNA1FO60840 1977 aa0.15□□□□□ -2.38
RNU6-542P-201ENST00000516405 ZNF646O15015 1829 aaPredicted RBP0.15□□□□□ -2.38
RNU6-542P-201ENST00000516405 CYP2D7A0A087X1C5 515 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 PNMA6FA0A0J9YX94 578 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 SMIM35A0A1B0GVV1 85 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 LACTBL1A8MY62 500 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 CBFA2T2O43439 604 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 MYO1BO43795 1136 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 DGKIO75912 1065 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 ATG7O95352 703 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 CRYABP02511 175 aaKnown RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 TP53P04637 393 aaPredicted RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 SSFA2P28290 1259 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 RPL36AP83881 106 aaKnown RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 DBPQ10586 325 aaPredicted RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 MOGSQ13724 837 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 RBM39Q14498 530 aaKnown RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 DAZAP2Q15038 168 aaPredicted RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 ENOX2Q16206 610 aaKnown RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 DDB1Q16531 1140 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 FAM214AQ32MH5 1076 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 KANK2Q63ZY3 851 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 CYP4F22Q6NT55 531 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 ZNF549Q6P9A3 640 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 MRPL10Q7Z7H8 261 aaKnown RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 B4GALNT2Q8NHY0 566 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 PIP4K2CQ8TBX8 421 aa0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 SLC7A6OSQ96CW6 309 aaPredicted RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 ZC3H10Q96K80 434 aaKnown RBP0.15□□□□□ -2.39
RNU6-542P-201ENST00000516405 AIFM2Q9BRQ8 373 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms