RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 RDM1Q8NG50 284 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 BCL7CQ8WUZ0 217 aaPredicted RBP17.72■□□□□ 0.43
LMNA-223ENST00000515459 PHKBQ93100 1093 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 NKD2Q969F2 451 aaPredicted RBP17.72■□□□□ 0.43
LMNA-223ENST00000515459 FDXACB1Q9BRP7 624 aaPredicted RBP17.72■□□□□ 0.43
LMNA-223ENST00000515459 FAM105AQ9NUU6 356 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 C2orf16Q68DN1 1984 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 IGKV6-21A0A0C4DH24 114 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 EDIL3O43854 480 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 ZNF623O75123 536 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 OFD1O75665 1012 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 CWF19L1Q69YN2 538 aaKnown RBP17.71■□□□□ 0.43
LMNA-223ENST00000515459 Q6ZUG5 572 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 OTOP3Q7RTS5 596 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 FRMD5Q7Z6J6 570 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 RHPN2Q8IUC4 686 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 BRF1Q92994 677 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 GJA10Q969M2 543 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 CEP89Q96ST8 783 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.43
LMNA-223ENST00000515459 GBP3Q9H0R5 595 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 DNAJB4Q9UDY4 337 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 STK39Q9UEW8 545 aa17.71■□□□□ 0.43
LMNA-223ENST00000515459 PTPRZ1P23471 2315 aaPredicted RBP17.71■□□□□ 0.43
LMNA-223ENST00000515459 TMEM150BA6NC51 233 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 MEIS3P2A8K0S8 358 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 PSMD10O75832 226 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 CPA1P15085 419 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 AOC1P19801 751 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 KLRC2P26717 231 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 SLC11A1P49279 550 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 TDGQ13569 410 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 CATSPER4Q7RTX7 472 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 FEZF2Q8TBJ5 459 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 PGBD4Q96DM1 585 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 SH2D3AQ9BRG2 576 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 EMILIN2Q9BXX0 1053 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 VPS54Q9P1Q0 977 aa17.7■□□□□ 0.42
LMNA-223ENST00000515459 SUCLA2Q9P2R7 463 aaPredicted RBP17.7■□□□□ 0.42
LMNA-223ENST00000515459 MAFO75444 373 aaPredicted RBP17.69■□□□□ 0.42
LMNA-223ENST00000515459 STBD1O95210 358 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 CLCN4P51793 760 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 NTRK3Q16288 839 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 Q4G0T1 1027 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 ZNF280BQ86YH2 543 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 URGCPQ8TCY9 931 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 NLRP4Q96MN2 994 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 KLHL5Q96PQ7 755 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 VN1R3Q9BXE9 311 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 SPTBN4Q9H254 2564 aa17.69■□□□□ 0.42
LMNA-223ENST00000515459 DDX11L8A8MPP1 907 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 SSBP05455 408 aaKnown RBP eCLIP17.68■□□□□ 0.42
LMNA-223ENST00000515459 NPR3P17342 541 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 LETM2Q2VYF4 491 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 C15orf39Q6ZRI6 1047 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 KSR1Q8IVT5 923 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 TBCKQ8TEA7 893 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 RTP3Q9BQQ7 232 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 JPH2Q9BR39 696 aaPredicted RBP17.68■□□□□ 0.42
LMNA-223ENST00000515459 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 C22orf23Q9BZE7 217 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 KCNK12Q9HB15 430 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 SH3GLB2Q9NR46 395 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 FBXL21Q9UKT6 434 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 DUSP12Q9UNI6 340 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 PCDHB2Q9Y5E7 798 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 FAM186AA6NE01 2351 aa17.68■□□□□ 0.42
LMNA-223ENST00000515459 RIF1Q5UIP0 2472 aaKnown RBP17.67■□□□□ 0.42
LMNA-223ENST00000515459 DMDP11532 3685 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 PI15O43692 258 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 B4GALT3O60512 393 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 DDHD2O94830 711 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 ALDH2P05091 517 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 CNPP09543 421 aaKnown RBP17.67■□□□□ 0.42
LMNA-223ENST00000515459 IFNAR1P17181 557 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 NLRP5P59047 1200 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 B3GNT9Q6UX72 402 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 AGMOQ6ZNB7 445 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 CCDC105Q8IYK2 499 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
LMNA-223ENST00000515459 FAM193BQ96PV7 902 aaPredicted RBP17.67■□□□□ 0.42
LMNA-223ENST00000515459 TMEM175Q9BSA9 504 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 RSAD1Q9HA92 442 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 IFT122Q9HBG6 1241 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 MRPL17Q9NRX2 175 aaKnown RBP17.67■□□□□ 0.42
LMNA-223ENST00000515459 AGPAT5Q9NUQ2 364 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 IGSF9Q9P2J2 1179 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 KANSL3Q9P2N6 904 aa17.67■□□□□ 0.42
LMNA-223ENST00000515459 CYP3A7-CYP3A51PA0A087WV96 503 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 CYP3A7P24462 503 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 BLOC1S2Q6QNY1 142 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 ANO5Q75V66 913 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 ERMP1Q7Z2K6 904 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 MRPL10Q7Z7H8 261 aaKnown RBP17.66■□□□□ 0.42
LMNA-223ENST00000515459 ADSSL1Q8N142 457 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 SIX5Q8N196 739 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 FBXL16Q8N461 479 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 FAN1Q9Y2M0 1017 aa17.66■□□□□ 0.42
LMNA-223ENST00000515459 CNTNAP2Q9UHC6 1331 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms