RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 LRP2BPQ9P2M1 347 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 ARMCX3Q9UH62 379 aaPredicted RBP13.78□□□□□ -0.2
SMAD1-215ENST00000515385 MEGF6O75095 1541 aa13.77□□□□□ -0.2
SMAD1-215ENST00000515385 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.2
SMAD1-215ENST00000515385 A0A1B0GVG6 124 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 MAGEB2O15479 319 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 ALAS1P13196 640 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 RASA1P20936 1047 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 PTPN4P29074 926 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 GRB10Q13322 594 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 ZNF568Q3ZCX4 644 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 ARMC3Q5W041 872 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 TRIM42Q8IWZ5 723 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 STKLD1Q8NE28 680 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 RFFLQ8WZ73 363 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 RAD54LQ92698 747 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 ERP27Q96DN0 273 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 TUBB6Q9BUF5 446 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 UBE2OQ9C0C9 1292 aaKnown RBP13.77□□□□□ -0.21
SMAD1-215ENST00000515385 IL1RAPL1Q9NZN1 696 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 SUN2Q9UH99 717 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 LNPEPQ9UIQ6 1025 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMAD1-215ENST00000515385 COMMD3-BMI1R4GMX3 469 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 MYH4Q9Y623 1939 aa13.77□□□□□ -0.21
SMAD1-215ENST00000515385 ATP9AO75110 1047 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 OATP04181 439 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 TMEM253P0C7T8 217 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 VEGFAP15692 232 aaPredicted RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 RPL21P46778 160 aaKnown RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 PRPF4BQ13523 1007 aaKnown RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 NONOQ15233 471 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 ESCO1Q5FWF5 840 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 FOXB2Q5VYV0 432 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 ANKRD42Q8N9B4 389 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 GLG1Q92896 1179 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 RAB34Q9BZG1 259 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 RMI1Q9H9A7 625 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 CIDEBQ9UHD4 219 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 NR2E1Q9Y466 385 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 MIF4GDA9UHW6 222 aaKnown RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 BRAFP15056 766 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 UCHL3P15374 230 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 TAC1P20366 129 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 FGFR4P22455 802 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 TECP42680 631 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 PPATQ06203 517 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 ACBD5Q5T8D3 534 aaPredicted RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 SNX30Q5VWJ9 437 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 NELFCDQ8IXH7 590 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 SDR42E1Q8WUS8 393 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 UCMAQ8WVF2 138 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 CTNNBL1Q8WYA6 563 aaPredicted RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 GPKOWQ92917 476 aaPredicted RBP eCLIP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 SLC7A6OSQ96CW6 309 aaPredicted RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 RBM17Q96I25 401 aaKnown RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 DENND2DQ9H6A0 471 aaPredicted RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 DNAAF2Q9NVR5 837 aaKnown RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 BARHL2Q9NY43 387 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 HAO1Q9UJM8 370 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.76□□□□□ -0.21
SMAD1-215ENST00000515385 CASZ1Q86V15 1759 aa13.76□□□□□ -0.21
SMAD1-215ENST00000515385 ADGRA3Q8IWK6 1321 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 CETN3O15182 167 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 KRT13P13646 458 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 LMNB1P20700 586 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 CTNNA2P26232 953 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 DEUP1Q05D60 604 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 SLC34A1Q06495 639 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 AP1B1Q10567 949 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 KCNH2Q12809 1159 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 MYBPC3Q14896 1274 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 RGS9BPQ6ZS82 235 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 ZNF365Q70YC5 407 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 DYMQ7RTS9 669 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 NEK8Q86SG6 692 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 SMC1BQ8NDV3 1235 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 SUPT20HQ8NEM7 779 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 SCG3Q8WXD2 468 aaKnown RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 DDX12PQ92771 950 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 CENPKQ9BS16 269 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 KIAA1683Q9H0B3 1180 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 CCDC87Q9NVE4 849 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 LGALS13Q9UHV8 139 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 PCDHA3Q9Y5H8 950 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 PFASO15067 1338 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 PASKQ96RG2 1323 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 RBM47A0AV96 593 aaKnown RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 MYBL1P10243 752 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 TARSP26639 723 aaKnown RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 SERPINB4P48594 390 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 RNASELQ05823 741 aaKnown RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 TMED1Q13445 227 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms