RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 C9IYK1 514 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
SUB1-213ENST00000515355 DGKIO75912 1065 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 F13A1P00488 732 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 NCLP19338 710 aaKnown RBP12.76□□□□□ -0.37
SUB1-213ENST00000515355 CTNNB1P35222 781 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 LONP1P36776 959 aaKnown RBP12.76□□□□□ -0.37
SUB1-213ENST00000515355 PTENP60484 403 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 DSC3Q14574 896 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 PTPAQ15257 358 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 ECHDC2Q86YB7 292 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 LPPQ93052 612 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 EPSTI1Q96J88 318 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 KIFC3Q9BVG8 833 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 RUSC1Q9BVN2 902 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 STXBP5LQ9Y2K9 1186 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 ADGRA3Q8IWK6 1321 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 CHD9Q3L8U1 2897 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 NPHP3-ACAD11A0A0J9YXS1 232 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 HIP1RO75146 1068 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 KRT18P05783 430 aaKnown RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 SIP14410 1827 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 PLCG1P19174 1290 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 TXLNAP40222 546 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 ADGRE1Q14246 886 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 SKIV2LQ15477 1246 aaKnown RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 EPC2Q52LR7 807 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 RINT1Q6NUQ1 792 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 USP49Q70CQ1 688 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 MICAL3Q7RTP6 2002 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 CDR2LQ86X02 465 aaPredicted RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 TMEM192Q8IY95 271 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 MAFAQ8NHW3 353 aaPredicted RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 BSNDQ8WZ55 320 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 SYMPKQ92797 1274 aaKnown RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 TRIM6Q9C030 488 aaPredicted RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 ZHX3Q9H4I2 956 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 CHST12Q9NRB3 414 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 AGPAT5Q9NUQ2 364 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 TMEM161AQ9NX61 479 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 CCDC39Q9UFE4 941 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 FBXO2Q9UK22 296 aaPredicted RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 INPP5FQ9Y2H2 1132 aa12.75□□□□□ -0.37
SUB1-213ENST00000515355 SRPRBQ9Y5M8 271 aaKnown RBP12.75□□□□□ -0.37
SUB1-213ENST00000515355 A0A0U1RQF3 1178 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 SPTLC2O15270 562 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 PEX3P56589 373 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 ERVK-21P61565 698 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 MBTD1Q05BQ5 628 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 GPM6BQ13491 265 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 MCM6Q14566 821 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 SLC39A14Q15043 492 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 PPP2R5AQ15172 486 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 NOTUMQ6P988 496 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 CMTR2Q8IYT2 770 aaKnown RBP12.74□□□□□ -0.37
SUB1-213ENST00000515355 HELQQ8TDG4 1101 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 KIFAP3Q92845 792 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 FAM105AQ9NUU6 356 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 USP20Q9Y2K6 914 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 PCDHB2Q9Y5E7 798 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 MRPL42Q9Y6G3 142 aaKnown RBP12.74□□□□□ -0.37
SUB1-213ENST00000515355 LOXHD1Q8IVV2 1947 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 GBF1Q92538 1859 aa12.74□□□□□ -0.37
SUB1-213ENST00000515355 MYO9BQ13459 2157 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 B4GALT5O43286 388 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 HOXA2O43364 376 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 TSPAN1O60635 241 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 SKIP12755 728 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 FAM189BP81408 668 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
SUB1-213ENST00000515355 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
SUB1-213ENST00000515355 TMEM119Q4V9L6 283 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 HYIQ5T013 277 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 RRAGBQ5VZM2 374 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 PDILTQ8N807 584 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 SYT2Q8N9I0 419 aaPredicted RBP12.73□□□□□ -0.37
SUB1-213ENST00000515355 LINC00301Q8NCQ3 95 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 ZNF689Q96CS4 500 aaPredicted RBP12.73□□□□□ -0.37
SUB1-213ENST00000515355 DRC1Q96MC2 740 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 ELAC1Q9H777 363 aaKnown RBP12.73□□□□□ -0.37
SUB1-213ENST00000515355 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 CHD7Q9P2D1 2997 aa12.73□□□□□ -0.37
SUB1-213ENST00000515355 NPTXRO95502 500 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 PRKCBP05771 671 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 ARF4P18085 180 aaPredicted RBP12.72□□□□□ -0.37
SUB1-213ENST00000515355 HOXA11P31270 313 aaPredicted RBP12.72□□□□□ -0.37
SUB1-213ENST00000515355 BMPR1AP36894 532 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 NAMPTP43490 491 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 ME1P48163 572 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 NASPP49321 788 aaPredicted RBP12.72□□□□□ -0.37
SUB1-213ENST00000515355 SLC12A3P55017 1021 aa12.72□□□□□ -0.37
SUB1-213ENST00000515355 RNASELQ05823 741 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms