RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 TBC1D13Q9NVG8 400 aa16.87■□□□□ 0.29
DDR1-278ENST00000515233 CDH22Q9UJ99 828 aa16.87■□□□□ 0.29
DDR1-278ENST00000515233 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
DDR1-278ENST00000515233 C2CD4DB7Z1M9 353 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 ZC3H11AO75152 810 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-278ENST00000515233 MTMR3Q13615 1198 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 NONOQ15233 471 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-278ENST00000515233 NOMO2Q5JPE7 1267 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 GLB1LQ6UWU2 654 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 TMEM173Q86WV6 379 aaPredicted RBP16.86■□□□□ 0.29
DDR1-278ENST00000515233 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 KREMEN2Q8NCW0 462 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 SLC22A17Q8WUG5 538 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 LPPQ93052 612 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 IFT122Q9HBG6 1241 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 DZANK1Q9NVP4 752 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 STK39Q9UEW8 545 aa16.86■□□□□ 0.29
DDR1-278ENST00000515233 CPLX1O14810 134 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 DKC1O60832 514 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-278ENST00000515233 SP100P23497 879 aaPredicted RBP16.85■□□□□ 0.29
DDR1-278ENST00000515233 PPP2R5CQ13362 524 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 ATAT1Q5SQI0 421 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 KIAA1841Q6NSI8 718 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 CATSPER4Q7RTX7 472 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 KSR1Q8IVT5 923 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 EXOC8Q8IYI6 725 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 ZDHHC14Q8IZN3 488 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 CYP26B1Q9NR63 512 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
DDR1-278ENST00000515233 USTQ9Y2C2 406 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 PPME1Q9Y570 386 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
DDR1-278ENST00000515233 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.84■□□□□ 0.29
DDR1-278ENST00000515233 MEIS3P2A8K0S8 358 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 EML1O00423 815 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 BRD1O95696 1058 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 CA8P35219 290 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 QARSP47897 775 aaKnown RBP16.84■□□□□ 0.29
DDR1-278ENST00000515233 RNASELQ05823 741 aaKnown RBP16.84■□□□□ 0.29
DDR1-278ENST00000515233 LONRF3Q496Y0 759 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 PPP4R3AQ6IN85 833 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 CPLX2Q6PUV4 134 aaKnown RBP16.84■□□□□ 0.29
DDR1-278ENST00000515233 KRT25Q7Z3Z0 450 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 SRGAP1Q7Z6B7 1085 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 MRPL10Q7Z7H8 261 aaKnown RBP16.84■□□□□ 0.29
DDR1-278ENST00000515233 PPFIBP1Q86W92 1011 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 TMEM87AQ8NBN3 555 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 FAM20AQ96MK3 541 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 NLRP4Q96MN2 994 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 TM6SF1Q9BZW5 370 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 DHX33Q9H6R0 707 aaKnown RBP16.84■□□□□ 0.29
DDR1-278ENST00000515233 KCNMB3Q9NPA1 279 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 AGPAT5Q9NUQ2 364 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 CYP46A1Q9Y6A2 500 aa16.84■□□□□ 0.29
DDR1-278ENST00000515233 USP34Q70CQ2 3546 aa16.83■□□□□ 0.29
DDR1-278ENST00000515233 SLC37A4O43826 429 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 ST18O60284 1047 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 PDGFBP01127 241 aaPredicted RBP16.83■□□□□ 0.28
DDR1-278ENST00000515233 P4HBP07237 508 aaKnown RBP16.83■□□□□ 0.28
DDR1-278ENST00000515233 EPCAMP16422 314 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 SLC11A1P49279 550 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 INF2Q27J81 1249 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 RARS2Q5T160 578 aaKnown RBP16.83■□□□□ 0.28
DDR1-278ENST00000515233 PLA2G4FQ68DD2 849 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 ZNF280BQ86YH2 543 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 C12orf76Q8N812 135 aaPredicted RBP16.83■□□□□ 0.28
DDR1-278ENST00000515233 BCL7CQ8WUZ0 217 aaPredicted RBP16.83■□□□□ 0.28
DDR1-278ENST00000515233 AUTS2Q8WXX7 1259 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 SLC7A3Q8WY07 619 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 AIFM3Q96NN9 605 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 DBR1Q9UK59 544 aaKnown RBP16.83■□□□□ 0.28
DDR1-278ENST00000515233 VAV3Q9UKW4 847 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 INPP5FQ9Y2H2 1132 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 PCDHB2Q9Y5E7 798 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 COL4A3BPQ9Y5P4 624 aa16.83■□□□□ 0.28
DDR1-278ENST00000515233 TBX3O15119 743 aa16.82■□□□□ 0.28
DDR1-278ENST00000515233 ALDH2P05091 517 aa16.82■□□□□ 0.28
DDR1-278ENST00000515233 NPEPPSP55786 919 aa16.82■□□□□ 0.28
DDR1-278ENST00000515233 LETM2Q2VYF4 491 aa16.82■□□□□ 0.28
DDR1-278ENST00000515233 KANK3Q6NY19 840 aa16.82■□□□□ 0.28
DDR1-278ENST00000515233 AGMOQ6ZNB7 445 aa16.82■□□□□ 0.28
DDR1-278ENST00000515233 C4orf19Q8IY42 314 aa16.82■□□□□ 0.28
DDR1-278ENST00000515233 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
DDR1-278ENST00000515233 TDRD5Q8NAT2 981 aaKnown RBP16.82■□□□□ 0.28
DDR1-278ENST00000515233 PRPF31Q8WWY3 499 aaKnown RBP16.82■□□□□ 0.28
DDR1-278ENST00000515233 VN1R3Q9BXE9 311 aa16.82■□□□□ 0.28
DDR1-278ENST00000515233 CNTNAP2Q9UHC6 1331 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 ASAP2O43150 1006 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 GAS2O43903 313 aaKnown RBP16.81■□□□□ 0.28
DDR1-278ENST00000515233 LILRB3O75022 631 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 DDHD2O94830 711 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 WEE2P0C1S8 567 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 GCFC2P16383 781 aaKnown RBP16.81■□□□□ 0.28
DDR1-278ENST00000515233 HOXA11P31270 313 aaPredicted RBP16.81■□□□□ 0.28
DDR1-278ENST00000515233 RFC5P40937 340 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms