RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TOB1P50616 345 aaPredicted RBP27.24■■□□□ 1.95
SNF8-213ENST00000514929 UBE3AQ05086 875 aa27.24■■□□□ 1.95
SNF8-213ENST00000514929 LEXMQ3ZCV2 418 aa27.24■■□□□ 1.95
SNF8-213ENST00000514929 POTEGQ6S5H5 508 aa27.24■■□□□ 1.95
SNF8-213ENST00000514929 C4orf32Q8N8J7 132 aa27.24■■□□□ 1.95
SNF8-213ENST00000514929 NECAB3Q96P71 396 aaPredicted RBP27.24■■□□□ 1.95
SNF8-213ENST00000514929 SMC3Q9UQE7 1217 aa27.24■■□□□ 1.95
SNF8-213ENST00000514929 PCDHB6Q9Y5E3 794 aa27.24■■□□□ 1.95
SNF8-213ENST00000514929 PLXNA4Q9HCM2 1894 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 TTC28Q96AY4 2481 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 ERLIN2O94905 339 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 FXR2P51116 673 aaKnown RBP eCLIP27.23■■□□□ 1.95
SNF8-213ENST00000514929 HYAL1Q12794 435 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 PTGDRQ13258 359 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 LONRF3Q496Y0 759 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 HAUS3Q68CZ6 603 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 ASAP3Q8TDY4 903 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 LPPQ93052 612 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 ZNF558Q96NG5 402 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 MRPL9Q9BYD2 267 aaKnown RBP27.23■■□□□ 1.95
SNF8-213ENST00000514929 IGFLR1Q9H665 355 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 LRWD1Q9UFC0 647 aa27.23■■□□□ 1.95
SNF8-213ENST00000514929 DBR1Q9UK59 544 aaKnown RBP27.23■■□□□ 1.95
SNF8-213ENST00000514929 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.23■■□□□ 1.95
SNF8-213ENST00000514929 H3BQ06 376 aaPredicted RBP27.22■■□□□ 1.95
SNF8-213ENST00000514929 IRS1P35568 1242 aa27.22■■□□□ 1.95
SNF8-213ENST00000514929 ARL2P36404 184 aa27.22■■□□□ 1.95
SNF8-213ENST00000514929 PTENP60484 403 aa27.22■■□□□ 1.95
SNF8-213ENST00000514929 CAPSQ13938 189 aa27.22■■□□□ 1.95
SNF8-213ENST00000514929 KCNT2Q6UVM3 1135 aa27.22■■□□□ 1.95
SNF8-213ENST00000514929 MICAL1Q8TDZ2 1067 aa27.22■■□□□ 1.95
SNF8-213ENST00000514929 PGBD4Q96DM1 585 aa27.22■■□□□ 1.95
SNF8-213ENST00000514929 POLR3FQ9H1D9 316 aaPredicted RBP27.22■■□□□ 1.95
SNF8-213ENST00000514929 BRWD1Q9NSI6 2320 aa27.22■■□□□ 1.95
SNF8-213ENST00000514929 MYO7AQ13402 2215 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 INO80B-WBP1J3KQ70 363 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 ZNF623O75123 536 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 CCT6AP40227 531 aaKnown RBP27.21■■□□□ 1.95
SNF8-213ENST00000514929 COL19A1Q14993 1142 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 PCBP1Q15365 356 aaKnown RBP eCLIP27.21■■□□□ 1.95
SNF8-213ENST00000514929 GLB1LQ6UWU2 654 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 MAEAQ7L5Y9 396 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 RSPH1Q8WYR4 309 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 RAB34Q9BZG1 259 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 TLR9Q9NR96 1032 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 PCDHB2Q9Y5E7 798 aa27.21■■□□□ 1.95
SNF8-213ENST00000514929 ARHGEF35A5YM69 484 aa27.2■■□□□ 1.94
SNF8-213ENST00000514929 GLRA2P23416 452 aa27.2■■□□□ 1.94
SNF8-213ENST00000514929 HOXA11P31270 313 aaPredicted RBP27.2■■□□□ 1.94
SNF8-213ENST00000514929 PPM1AP35813 382 aa27.2■■□□□ 1.94
SNF8-213ENST00000514929 PBX3P40426 434 aa27.2■■□□□ 1.94
SNF8-213ENST00000514929 POU5F1BQ06416 359 aa27.2■■□□□ 1.94
SNF8-213ENST00000514929 NCBP1Q09161 790 aaKnown RBP27.2■■□□□ 1.94
SNF8-213ENST00000514929 MCPH1Q8NEM0 835 aa27.2■■□□□ 1.94
SNF8-213ENST00000514929 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.2■■□□□ 1.94
SNF8-213ENST00000514929 PUF60Q9UHX1 559 aaKnown RBP27.2■■□□□ 1.94
SNF8-213ENST00000514929 LAD1O00515 517 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 MUTP22033 750 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 GTF2F1P35269 517 aaKnown RBP eCLIP27.19■■□□□ 1.94
SNF8-213ENST00000514929 PLCB3Q01970 1234 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 PDIA5Q14554 519 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 RILPL1Q5EBL4 403 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 PTCRAQ6ISU1 281 aaPredicted RBP27.19■■□□□ 1.94
SNF8-213ENST00000514929 ADGRD2Q7Z7M1 963 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 IFNLR1Q8IU57 520 aaPredicted RBP27.19■■□□□ 1.94
SNF8-213ENST00000514929 GPRC5CQ9NQ84 441 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 SPG21Q9NZD8 308 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 INPP5FQ9Y2H2 1132 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 STK24Q9Y6E0 443 aa27.19■■□□□ 1.94
SNF8-213ENST00000514929 MEIS3P2A8K0S8 358 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 TSPAN1O60635 241 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 AXLP30530 894 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 KRT17Q04695 432 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 CTC1Q2NKJ3 1217 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 PUS10Q3MIT2 529 aaKnown RBP27.18■■□□□ 1.94
SNF8-213ENST00000514929 NOMO2Q5JPE7 1267 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 PADI6Q6TGC4 694 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 MRPS27Q92552 414 aaKnown RBP27.18■■□□□ 1.94
SNF8-213ENST00000514929 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.18■■□□□ 1.94
SNF8-213ENST00000514929 LZTS1Q9Y250 596 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 PCDHGC5Q9Y5F6 944 aa27.18■■□□□ 1.94
SNF8-213ENST00000514929 LRRIQ4A6NIV6 560 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 ERVFC1P60507 584 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 MBTD1Q05BQ5 628 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 UBXN11Q5T124 520 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 LARP1BQ659C4 914 aaKnown RBP27.17■■□□□ 1.94
SNF8-213ENST00000514929 PDE12Q6L8Q7 609 aaKnown RBP27.17■■□□□ 1.94
SNF8-213ENST00000514929 NOTUMQ6P988 496 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 DTHD1Q6ZMT9 781 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 RBM23Q86U06 439 aaKnown RBP27.17■■□□□ 1.94
SNF8-213ENST00000514929 IGSF22Q8N9C0 903 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 SNX29Q8TEQ0 813 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 NFKBIZQ9BYH8 718 aa27.17■■□□□ 1.94
SNF8-213ENST00000514929 LINC01565O15544 149 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 OFD1O75665 1012 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 LTBRP36941 435 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 PRPHP41219 470 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 NRIP1P48552 1158 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 ALDH7A1P49419 539 aaKnown RBP27.16■■□□□ 1.94
SNF8-213ENST00000514929 RNASELQ05823 741 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms