RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NDEL1Q9GZM8 345 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 DDX25Q9UHL0 483 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SLC30A1Q9Y6M5 507 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 MYPNQ86TC9 1320 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 RBBP6Q7Z6E9 1792 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 A0A0B4J203 849 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 FAM25EA8MYX2 175 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 NKRFO15226 690 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 ANP32DO95626 131 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SRGNP10124 158 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SHMT1P34896 483 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 MSL1Q68DK7 614 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 FIP1L1Q6UN15 594 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 ZNF365Q70YC5 407 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 ZNF554Q86TJ5 538 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 EXOC3L1Q86VI1 746 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 ERICH1Q86X53 443 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 LRRC47Q8N1G4 583 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 CCDC12Q8WUD4 166 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 TRIM9Q9C026 710 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 COA1Q9GZY4 146 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 C6orf50Q9HD87 102 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 HAUS2Q9NVX0 235 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 DAAM1Q9Y4D1 1078 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SPDYE5A6NIY4 337 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 H0Y3Z8 333 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SLC37A4O43826 429 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 CCNCP24863 283 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 GNA11P29992 359 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 HSPA1LP34931 641 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 UBA7P41226 1012 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 COX10Q12887 443 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SUZ12Q15022 739 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 MUM1Q2TAK8 710 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 TMC4Q7Z404 712 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 PPFIBP1Q86W92 1011 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 GRAMD2AQ8IUY3 354 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 CNGA4Q8IV77 575 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 RNF10Q8N5U6 811 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 KIAA1958Q8N8K9 716 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 ACMSDQ8TDX5 336 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 ZFPM2Q8WW38 1151 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 CCDC51Q96ER9 411 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 CLMNQ96JQ2 1002 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 CUEDC2Q9H467 287 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 VAT1LQ9HCJ6 419 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 MYO3BQ8WXR4 1341 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 TTC34A8MYJ7 566 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 F8W031 263 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 H7C1D1 291 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 NPTXRO95502 500 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 TECP42680 631 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 CLK2P49760 499 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 GNGT1P63211 74 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 SPAG1Q07617 926 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 ZNF362Q5T0B9 420 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 DPP8Q6V1X1 898 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 REXO1Q8N1G1 1221 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 C7orf57Q8NEG2 295 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 COA7Q96BR5 231 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 UROC1Q96N76 676 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 C7orf25Q9BPX7 421 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 EHD4Q9H223 541 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 DNAJC18Q9H819 358 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 MAGEF1Q9HAY2 307 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 NOD2Q9HC29 1040 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 hCG_1984214I3L0E3 225 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 EIF3HO15372 352 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 S100A5P33763 92 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 EIF6P56537 245 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 STK4Q13043 487 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 GRB10Q13322 594 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 ORC2Q13416 577 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 CASP8Q14790 479 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 ASPRV1Q53RT3 343 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 APOBEC3HQ6NTF7 200 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 TAOK1Q7L7X3 1001 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 CCDC110Q8TBZ0 833 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 EEF2KMTQ96G04 330 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 PNMA5Q96PV4 448 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 THAP9Q9H5L6 903 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 JMJD4Q9H9V9 463 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 PLCB1Q9NQ66 1216 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 BLOC1S4Q9NUP1 217 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 NOP53Q9NZM5 478 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 SEC63Q9UGP8 760 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 CHMP2BQ9UQN3 213 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 LUC7L2Q9Y383 392 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 TDP2O95551 362 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 FCER1AP12319 257 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 PIK3CAP42336 1068 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 MNX1P50219 401 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 ZNF543Q08ER8 600 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 CDC42EP5Q6NZY7 148 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 RSRC2Q7L4I2 434 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 SRGAP1Q7Z6B7 1085 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 KIAA0895Q8NCT3 520 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms