RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MCM7P33993 719 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 PBX3P40426 434 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 NRIP1P48552 1158 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 RARRES1P49788 294 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 SMAD4Q13485 552 aaKnown RBP11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 SMAD2Q15796 467 aaKnown RBP11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 PDE12Q6L8Q7 609 aaKnown RBP11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 SLC39A11Q8N1S5 342 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 RNF149Q8NC42 400 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 KHSRPQ92945 711 aaKnown RBP eCLIP11.66□□□□□ -0.549e-6■■■□□ 17.9
HMGXB3-205ENST00000514469 MSLNLQ96KJ4 702 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 CLEC1BQ9P126 229 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 PRKAG3Q9UGI9 489 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 FSD2A1L4K1 749 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 MEIS3P2A8K0S8 358 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 DGAT1O75907 488 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 EYA4O95677 639 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 OR52Z1P0C646 297 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 SRGAP2CP0DJJ0 459 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 ATP2B1P20020 1258 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 HOXA11P31270 313 aaPredicted RBP11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 NDUFV1P49821 464 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 ERVFC1P60507 584 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 ZP2Q05996 745 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 COASYQ13057 564 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 MXD4Q14582 209 aaPredicted RBP11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 RABEP1Q15276 862 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 PCBP1Q15365 356 aaKnown RBP eCLIP11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 CLUL1Q15846 466 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 DUSP6Q16828 381 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 IFNLR1Q8IU57 520 aaPredicted RBP11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 GJD3Q8N144 294 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 LPPQ93052 612 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 CDCA3Q99618 268 aaPredicted RBP11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 C1QTNF1Q9BXJ1 281 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 SPG21Q9NZD8 308 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 CD207Q9UJ71 328 aa11.65□□□□□ -0.54
HMGXB3-205ENST00000514469 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 TSPAN1O60635 241 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 MED24O75448 989 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 OFD1O75665 1012 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 ARL2P36404 184 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 TRAPPC10P48553 1259 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 BCAR1P56945 870 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 PTENP60484 403 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 POU5F1BQ06416 359 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 CAPSQ13938 189 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 TTC38Q5R3I4 469 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 PLPP4Q5VZY2 271 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 GLB1LQ6UWU2 654 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 RBM23Q86U06 439 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 CATSPER3Q86XQ3 398 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 ADHFE1Q8IWW8 467 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 FAM184AQ8NB25 1140 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 SMRP1Q8NCR6 262 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 VN1R2Q8NFZ6 395 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 ASAP3Q8TDY4 903 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 MICAL1Q8TDZ2 1067 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 PIGOQ8TEQ8 1089 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 CCDC43Q96MW1 224 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 TCF25Q9BQ70 676 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 POLR3CQ9BUI4 534 aaPredicted RBP11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 NFKBIZQ9BYH8 718 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 EPHX3Q9H6B9 360 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 TLE6Q9H808 572 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 TUFT1Q9NNX1 390 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 NGRNQ9NPE2 291 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 ENTPD7Q9NQZ7 604 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 TBC1D13Q9NVG8 400 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 PUF60Q9UHX1 559 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 DBR1Q9UK59 544 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 BARX2Q9UMQ3 279 aaPredicted RBP11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 PCDHB2Q9Y5E7 798 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 C5orf42Q9H799 3197 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 BRWD1Q9NSI6 2320 aa11.64□□□□□ -0.55
HMGXB3-205ENST00000514469 CNTNAP2Q9UHC6 1331 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 CARNS1A5YM72 827 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 PI4K2BG5E9Z4 385 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 PER2O15055 1255 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 USO1O60763 962 aaKnown RBP11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 ZC3H11AO75152 810 aaKnown RBP eCLIP11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 ERLIN2O94905 339 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 XRCC6P12956 609 aaKnown RBP eCLIP11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 NCLP19338 710 aaKnown RBP11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 GLRA2P23416 452 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 U2AF2P26368 475 aaKnown RBP eCLIP11.63□□□□□ -0.554e-6■■■■□ 21.1
HMGXB3-205ENST00000514469 AXLP30530 894 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 SSTR3P32745 418 aaPredicted RBP11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 TECP42680 631 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 KRT17Q04695 432 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 GNL2Q13823 731 aaKnown RBP11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 KCNC3Q14003 757 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 TFDP1Q14186 410 aa11.63□□□□□ -0.55
HMGXB3-205ENST00000514469 ZNF174Q15697 407 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms