RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 GCLMP48507 274 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 IFI16Q16666 785 aaKnown RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 ARHGAP44Q17R89 818 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 C1orf220Q5T0J3 134 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 CATSPERGQ6ZRH7 1159 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 ZNF771Q7L3S4 317 aaPredicted RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 SLC17A8Q8NDX2 589 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 TPCN2Q8NHX9 752 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 PLEKHO2Q8TD55 490 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 RUBCNQ92622 972 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 HINFPQ9BQA5 517 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 KIFC3Q9BVG8 833 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 ZMYND15Q9H091 742 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 ACAD9Q9H845 621 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 CYP39A1Q9NYL5 469 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 TMOD4Q9NZQ9 345 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 GABBR1Q9UBS5 961 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 INTUQ9ULD6 942 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 TELO2Q9Y4R8 837 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 COL11A1P12107 1806 aaPredicted RBP8.9□□□□□ -0.98
CPNE4-211ENST00000514439 A0A0A6YYK5 440 aaPredicted RBP8.9□□□□□ -0.98
CPNE4-211ENST00000514439 CCDC169A6NNP5 214 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 SPDYE16A6NNV3 312 aaPredicted RBP8.9□□□□□ -0.98
CPNE4-211ENST00000514439 MAPK13O15264 365 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 N4BP1O75113 896 aaKnown RBP8.9□□□□□ -0.98
CPNE4-211ENST00000514439 LRRN2O75325 713 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 KIF4AO95239 1232 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 ADRB2P07550 413 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 LMNB1P20700 586 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 NPTX2P47972 431 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 GALCP54803 685 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 SNRPFP62306 86 aaKnown RBP8.9□□□□□ -0.98
CPNE4-211ENST00000514439 FAM193AP78312 1265 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 SLC7A5Q01650 507 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 DMP1Q13316 513 aaPredicted RBP8.9□□□□□ -0.98
CPNE4-211ENST00000514439 EPC2Q52LR7 807 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 NOL9Q5SY16 702 aaKnown RBP8.9□□□□□ -0.98
CPNE4-211ENST00000514439 C8orf74Q6P047 294 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 FMNL3Q8IVF7 1028 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 MAP4K3Q8IVH8 894 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 TMEM161BQ8NDZ6 487 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 NLGN2Q8NFZ4 835 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 BSNDQ8WZ55 320 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 ATP6V0A1Q93050 837 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 CEP170P1Q96L14 293 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 GDAP1L1Q96MZ0 367 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 IWS1Q96ST2 819 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 VIPAS39Q9H9C1 493 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 STIM2Q9P246 746 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 TBX20Q9UMR3 447 aa8.9□□□□□ -0.98
CPNE4-211ENST00000514439 GOLGA8IPA6NC78 632 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 GOLGA8JA6NMD2 632 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 ANKRD63C9JTQ0 380 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 FOXN3O00409 490 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-211ENST00000514439 P4HA2O15460 535 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 STBD1O95210 358 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 CCDC172P0C7W6 258 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 ADSSP30520 456 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 SMTNP53814 917 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 HIRAP54198 1017 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-211ENST00000514439 SOX10P56693 466 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 SP4Q02446 784 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 CETN1Q12798 172 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 PRKG1Q13976 671 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 RPS6KA1Q15418 735 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 PTPROQ16827 1216 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 OTUD6AQ7L8S5 288 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 ARHGEF19Q8IW93 802 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 AENQ8WTP8 325 aaKnown RBP8.89□□□□□ -0.99
CPNE4-211ENST00000514439 TAF4BQ92750 862 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 SELENOOQ9BVL4 669 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 ACBD3Q9H3P7 528 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 JPH1Q9HDC5 661 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-211ENST00000514439 HPCAL4Q9UM19 191 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 EXOC7Q9UPT5 735 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 AFG3L2Q9Y4W6 797 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 PPP2R3BQ9Y5P8 575 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 NCANO14594 1321 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 NFASCO94856 1347 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 A0A0U1RQG5 324 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-211ENST00000514439 DENND3A2RUS2 1198 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 TMCO5BA8MYB1 307 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 KCNK3O14649 394 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 PSAPP07602 524 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 MXI1P50539 228 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 GYS2P54840 703 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 PRKCEQ02156 737 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 KIF22Q14807 665 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 SWSAP1Q6NVH7 229 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 CCDC125Q86Z20 511 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 CBWD2Q8IUF1 395 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 CCDC60Q8IWA6 550 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-211ENST00000514439 SPIRE2Q8WWL2 714 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 KIFAP3Q92845 792 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 HVCN1Q96D96 273 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 SAAL1Q96ER3 474 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 CDHR1Q96JP9 859 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 TMEM117Q9H0C3 514 aa8.89□□□□□ -0.99
CPNE4-211ENST00000514439 UBE2TQ9NPD8 197 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms