RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	NRG3	P56975	720 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	SESN3	P58005	492 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	BROX	Q5VW32	411 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	KRT40	Q6A162	431 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	MFSD5	Q6N075	450 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	RNF207	Q6ZRF8	634 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	SPRED1	Q7Z699	444 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	D2HGDH	Q8N465	521 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	UIMC1	Q96RL1	719 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	SOX7	Q9BT81	388 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	IL23A	Q9NPF7	189 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	TLR9	Q9NR96	1032 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	PRKAB1	Q9Y478	270 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	KDM1A	O60341	852 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	PCDH8	O95206	1070 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	GAA	P10253	952 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	MANF	P55145	182 aa	Known RBP	5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	ZXDA	P98168	799 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	CRIP3	Q6Q6R5	217 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	CMTM4	Q8IZR5	234 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	CHAC2	Q8WUX2	184 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	PAWR	Q96IZ0	340 aa	Known RBP	5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	RPL10L	Q96L21	214 aa	Known RBP	5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	TCF25	Q9BQ70	676 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	RCAN3	Q9UKA8	241 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	GIT1	Q9Y2X7	761 aa		5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	NOC2L	Q9Y3T9	749 aa	Known RBP	5.92	□□□□□ -1.46
MATR3-223	ENST00000514402	KRTAP23-1	A1A580	65 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	PRSS38	A1L453	326 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	CPE	P16870	476 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	TACR2	P21452	398 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	HIBADH	P31937	336 aa	Known RBP	5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	MEF2A	Q02078	507 aa	Predicted RBP	5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	FAP	Q12884	760 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	MIIP	Q5JXC2	388 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	FAM111B	Q6SJ93	734 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	GAREM2	Q75VX8	874 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	SGMS1	Q86VZ5	419 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	GLB1L2	Q8IW92	636 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	GAB3	Q8WWW8	586 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	MIEF2	Q96C03	454 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	ACAP3	Q96P50	834 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	VPS11	Q9H270	941 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	PPP2R3B	Q9Y5P8	575 aa		5.91	□□□□□ -1.46
MATR3-223	ENST00000514402	CAPN14	A8MX76	684 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	VIL1	P09327	827 aa	Known RBP	5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	MASP1	P48740	699 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	WNT3A	P56704	352 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	SPIDR	Q14159	915 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	USP39	Q53GS9	565 aa	Known RBP	5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	KRT26	Q7Z3Y9	468 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	OR14C36	Q8NHC7	312 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	TMEM176A	Q96HP8	235 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	ZNF747	Q9BV97	191 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	PRSS50	Q9UI38	385 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	TMPRSS11E	Q9UL52	423 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	SH3BP1	Q9Y3L3	701 aa		5.9	□□□□□ -1.46
MATR3-223	ENST00000514402	UBE2QL1	A1L167	161 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	NEMP1	O14524	444 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	C6	P13671	934 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	NPEPPS	P55786	919 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	FOXE3	Q13461	319 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	NRN1L	Q496H8	165 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	FKBP15	Q5T1M5	1219 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	LMBR1L	Q6UX01	489 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	USP51	Q70EK9	711 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	TAS1R1	Q7RTX1	841 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	AFAP1L2	Q8N4X5	818 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	ZNF503	Q96F45	646 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	USP18	Q9UMW8	372 aa		5.89	□□□□□ -1.47
MATR3-223	ENST00000514402	FZD7	O75084	574 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	MFAP3L	O75121	409 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	ALDH1A2	O94788	518 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	IPO13	O94829	963 aa	Known RBP	5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	LY86	O95711	162 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	CD69	Q07108	199 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	STRN3	Q13033	797 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	GJC2	Q5T442	439 aa	Predicted RBP	5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	ZNF662	Q6ZS27	426 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	TMPRSS6	Q8IU80	811 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	SLC41A1	Q8IVJ1	513 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	C1orf210	Q8IVY1	113 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	PIK3C3	Q8NEB9	887 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	ARL8A	Q96BM9	186 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	TMPRSS5	Q9H3S3	457 aa		5.88	□□□□□ -1.47
MATR3-223	ENST00000514402	HECA	Q9UBI9	543 aa	Predicted RBP	5.88	□□□□□ -1.47
MATR3-223	ENST00000514402		A0A1W2PR48	441 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	CYR61	O00622	381 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	PEX11B	O96011	259 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	GDF5	P43026	501 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	PPARA	Q07869	468 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	ACAP1	Q15027	740 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	ELAVL1	Q15717	326 aa	Known RBP	5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms