RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ACEP12821 1306 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 SPATA31A1Q5TZJ5 1347 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 ARHGEF10O15013 1369 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 CPSF1Q10570 1443 aaKnown RBP5.65□□□□□ -1.5
CLDND1-228ENST00000513873 SMG6Q86US8 1419 aaKnown RBP5.65□□□□□ -1.5
CLDND1-228ENST00000513873 ATP10DQ9P241 1426 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 KCNK3O14649 394 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 KRT37O76014 449 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 SDSP20132 328 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 KCNC1P48547 511 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 HTRA3P83110 453 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 LMOD3Q0VAK6 560 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 ZNF174Q15697 407 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 TKFCQ3LXA3 575 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 SPATS1Q496A3 300 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 CDCA2Q69YH5 1023 aaPredicted RBP5.65□□□□□ -1.5
CLDND1-228ENST00000513873 HHIPL2Q6UWX4 724 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 OVCH1Q7RTY7 1134 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 FAM124AQ86V42 546 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 KCNH5Q8NCM2 988 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 SH3RF2Q8TEC5 729 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 BOCQ9BWV1 1114 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 L2HGDHQ9H9P8 463 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 SMURF1Q9HCE7 757 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 IFT57Q9NWB7 429 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 ARHGAP20Q9P2F6 1191 aa5.65□□□□□ -1.5
CLDND1-228ENST00000513873 TTC21BQ7Z4L5 1316 aa5.65□□□□□ -1.51
CLDND1-228ENST00000513873 SBNO1A3KN83 1393 aa5.65□□□□□ -1.51
CLDND1-228ENST00000513873 RGPD8O14715 1765 aaPredicted RBP5.65□□□□□ -1.51
CLDND1-228ENST00000513873 SH3D21A4FU49 640 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 H7C1D1 291 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 PPM1GO15355 546 aaPredicted RBP5.64□□□□□ -1.51
CLDND1-228ENST00000513873 GAS7O60861 476 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 IGSF3O75054 1194 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 CYP1A1P04798 512 aaPredicted RBP5.64□□□□□ -1.51
CLDND1-228ENST00000513873 RPL13P26373 211 aaKnown RBP5.64□□□□□ -1.51
CLDND1-228ENST00000513873 THBS2P35442 1172 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 IRF9Q00978 393 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 ZNF460Q14592 562 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 TMEM132BQ14DG7 1078 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 PLEKHG4Q58EX7 1191 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 CD276Q5ZPR3 534 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 ABHD17CQ6PCB6 329 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 DPP8Q6V1X1 898 aaPredicted RBP5.64□□□□□ -1.51
CLDND1-228ENST00000513873 LIPIQ6XZB0 460 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 KIAA0907Q7Z7F0 614 aaPredicted RBP5.64□□□□□ -1.51
CLDND1-228ENST00000513873 LRRTM3Q86VH5 581 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 WDR63Q8IWG1 891 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 PPM1KQ8N3J5 372 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 CHST14Q8NCH0 376 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 IGDCC4Q8TDY8 1250 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
CLDND1-228ENST00000513873 MFSD3Q96ES6 412 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 ZSWIM3Q96MP5 696 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 PCIF1Q9H4Z3 704 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 MYH16Q9H6N6 1097 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 KCNH7Q9NS40 1196 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 TELO2Q9Y4R8 837 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 ARHGEF28Q8N1W1 1705 aaKnown RBP5.64□□□□□ -1.51
CLDND1-228ENST00000513873 WDR90Q96KV7 1748 aa5.64□□□□□ -1.51
CLDND1-228ENST00000513873 COL24A1Q17RW2 1714 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 FMN2Q9NZ56 1722 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 PTPDC1A2A3K4 754 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 FAM90A27PA6NNH2 459 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 FFAR3O14843 346 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 KPNA6O60684 536 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 GLRX3O76003 335 aaKnown RBP5.63□□□□□ -1.51
CLDND1-228ENST00000513873 GLRBP48167 497 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 HERVK_113P62684 666 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 PFKPQ01813 784 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 DBPQ10586 325 aaPredicted RBP5.63□□□□□ -1.51
CLDND1-228ENST00000513873 PUM1Q14671 1186 aaKnown RBP eCLIP5.63□□□□□ -1.51
CLDND1-228ENST00000513873 SLC15A2Q16348 729 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 SKIDA1Q1XH10 827 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 CPZQ66K79 652 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 TRMT10BQ6PF06 316 aaKnown RBP5.63□□□□□ -1.51
CLDND1-228ENST00000513873 CARFQ8N187 725 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 HIPK4Q8NE63 616 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 USP40Q9NVE5 1235 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 STK32BQ9NY57 414 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 FTSJ1Q9UET6 329 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 KIF24Q5T7B8 1368 aa5.63□□□□□ -1.51
CLDND1-228ENST00000513873 KNDC1Q76NI1 1749 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 ZNF839A8K0R7 811 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 ACOT7O00154 380 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 DDX3XO00571 662 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLDND1-228ENST00000513873 APAF1O14727 1248 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 FOXP2O15409 715 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 CT47B1P0C2W7 299 aaPredicted RBP5.62□□□□□ -1.51
CLDND1-228ENST00000513873 INSRRP14616 1297 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 IL13P35225 146 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 AMPHP49418 695 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 SCNN1BP51168 640 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 GYS2P54840 703 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 SLURP1P55000 103 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 GJA9P57773 515 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 KIAA2012Q0VF49 1180 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 ADAM9Q13443 819 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 VWA3BQ502W6 1294 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 DALRD3Q5D0E6 543 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms