RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 PGBD4Q96DM1 585 aa6.56□□□□□ -1.36
SSBP2-217ENST00000513785 GPR87Q9BY21 358 aa6.56□□□□□ -1.36
SSBP2-217ENST00000513785 RCAN3Q9UKA8 241 aa6.56□□□□□ -1.36
SSBP2-217ENST00000513785 WDR97A6NE52 1622 aa6.56□□□□□ -1.36
SSBP2-217ENST00000513785 IFT140Q96RY7 1462 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 TARBP1Q13395 1621 aaKnown RBP6.55□□□□□ -1.36
SSBP2-217ENST00000513785 A0A0A6YYK5 440 aaPredicted RBP6.55□□□□□ -1.36
SSBP2-217ENST00000513785 KLRG2A4D1S0 409 aaPredicted RBP6.55□□□□□ -1.36
SSBP2-217ENST00000513785 FAM20BO75063 409 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 PEX11BO96011 259 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 BCAR1P56945 870 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 C1QL3Q5VWW1 255 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 KRT40Q6A162 431 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 MRGPRGQ86SM5 289 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 NME9Q86XW9 330 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 ULK2Q8IYT8 1036 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 RTF1Q92541 710 aaKnown RBP6.55□□□□□ -1.36
SSBP2-217ENST00000513785 AGAP2Q99490 1192 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 SOX7Q9BT81 388 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 MYL10Q9BUA6 226 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 POFUT1Q9H488 388 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 MTG2Q9H4K7 406 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 H2AFY2Q9P0M6 372 aaPredicted RBP6.55□□□□□ -1.36
SSBP2-217ENST00000513785 NCDNQ9UBB6 729 aa6.55□□□□□ -1.36
SSBP2-217ENST00000513785 CUX2O14529 1486 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 RAD54L2Q9Y4B4 1467 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 A0A0A6YYJ9 748 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 STC2O76061 302 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 PRPF6O94906 941 aaKnown RBP6.54□□□□□ -1.36
SSBP2-217ENST00000513785 APOL3O95236 402 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 JUNP05412 331 aaKnown RBP6.54□□□□□ -1.36
SSBP2-217ENST00000513785 KIR2DL3P43628 341 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 PURAQ00577 322 aaKnown RBP6.54□□□□□ -1.36
SSBP2-217ENST00000513785 ADCY2Q08462 1091 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 CFAP100Q494V2 611 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 FAM9AQ8IZU1 332 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-217ENST00000513785 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 SH3TC2Q8TF17 1288 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 RPGRQ92834 1020 aaKnown RBP6.54□□□□□ -1.36
SSBP2-217ENST00000513785 ZNF512Q96ME7 567 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-217ENST00000513785 PITHD1Q9GZP4 211 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-217ENST00000513785 OXSMQ9NWU1 459 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 SPO11Q9Y5K1 396 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 DMRT1Q9Y5R6 373 aa6.54□□□□□ -1.36
SSBP2-217ENST00000513785 DAPK3O43293 454 aa6.53□□□□□ -1.36
SSBP2-217ENST00000513785 UBE2R2Q712K3 238 aaPredicted RBP6.53□□□□□ -1.36
SSBP2-217ENST00000513785 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
SSBP2-217ENST00000513785 ATXN2LQ8WWM7 1075 aaKnown RBP6.53□□□□□ -1.36
SSBP2-217ENST00000513785 MNTQ99583 582 aa6.53□□□□□ -1.36
SSBP2-217ENST00000513785 TTPALQ9BTX7 342 aa6.53□□□□□ -1.36
SSBP2-217ENST00000513785 NRDE2Q9H7Z3 1164 aa6.53□□□□□ -1.36
SSBP2-217ENST00000513785 TOMM22Q9NS69 142 aa6.53□□□□□ -1.36
SSBP2-217ENST00000513785 OPHN1O60890 802 aa6.52□□□□□ -1.37
SSBP2-217ENST00000513785 ATP2A2P16615 1042 aaKnown RBP6.52□□□□□ -1.37
SSBP2-217ENST00000513785 SMAD3P84022 425 aaKnown RBP6.52□□□□□ -1.37
SSBP2-217ENST00000513785 ADCY1Q08828 1119 aa6.52□□□□□ -1.37
SSBP2-217ENST00000513785 PABPC4Q13310 644 aaKnown RBP eCLIP6.52□□□□□ -1.37
SSBP2-217ENST00000513785 ZNF662Q6ZS27 426 aa6.52□□□□□ -1.37
SSBP2-217ENST00000513785 PHYKPLQ8IUZ5 450 aa6.52□□□□□ -1.37
SSBP2-217ENST00000513785 CMTM4Q8IZR5 234 aa6.52□□□□□ -1.37
SSBP2-217ENST00000513785 C7orf31Q8N865 590 aa6.52□□□□□ -1.37
SSBP2-217ENST00000513785 ZMAT4Q9H898 229 aa6.52□□□□□ -1.37
SSBP2-217ENST00000513785 C14orf93Q9H972 538 aaKnown RBP6.52□□□□□ -1.37
SSBP2-217ENST00000513785 TRPS1Q9UHF7 1281 aa6.52□□□□□ -1.37
SSBP2-217ENST00000513785 RUSC2Q8N2Y8 1516 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 ABCA5Q8WWZ7 1642 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 RAMP2O60895 175 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 ASMTLO95671 621 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 CFBP00751 764 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 TGM1P22735 817 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 FLT3P36888 993 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 NANOS3P60323 173 aaKnown RBP6.51□□□□□ -1.37
SSBP2-217ENST00000513785 SPIDRQ14159 915 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 C21orf62-AS1Q17RA5 79 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 FAM214AQ32MH5 1076 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 CCDC144BQ3MJ40 725 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 RABL3Q5HYI8 236 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 KIAA1841Q6NSI8 718 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 TIGD7Q6NT04 549 aaPredicted RBP6.51□□□□□ -1.37
SSBP2-217ENST00000513785 HTR3DQ70Z44 454 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 MRGPREQ86SM8 312 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 NXPE1Q8N323 547 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 MDGA1Q8NFP4 955 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 ARL8AQ96BM9 186 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 PRRX2Q99811 253 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 ING3Q9NXR8 418 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 SYNPO2Q9UMS6 1093 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 GAPVD1Q14C86 1478 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 PBRM1Q86U86 1689 aa6.51□□□□□ -1.37
SSBP2-217ENST00000513785 CUL7Q14999 1698 aa6.5□□□□□ -1.37
SSBP2-217ENST00000513785 TDRD9Q8NDG6 1382 aaKnown RBP6.5□□□□□ -1.37
SSBP2-217ENST00000513785 FAM83GA6ND36 823 aa6.5□□□□□ -1.37
SSBP2-217ENST00000513785 GRXCR1A8MXD5 290 aa6.5□□□□□ -1.37
SSBP2-217ENST00000513785 ELL2O00472 640 aaPredicted RBP6.5□□□□□ -1.37
SSBP2-217ENST00000513785 FOXN1O15353 648 aa6.5□□□□□ -1.37
SSBP2-217ENST00000513785 MFAP3LO75121 409 aa6.5□□□□□ -1.37
SSBP2-217ENST00000513785 NPEPPSP55786 919 aa6.5□□□□□ -1.37
SSBP2-217ENST00000513785 COL10A1Q03692 680 aa6.5□□□□□ -1.37
SSBP2-217ENST00000513785 MFSD5Q6N075 450 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms