RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	MUC6	Q6W4X9	2439 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	WNT7A	O00755	349 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	NEMF	O60524	1076 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	ALAD	P13716	330 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	POLG	P54098	1239 aa	Predicted RBP	18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	KCNC3	Q14003	757 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	NCAPH2	Q6IBW4	605 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	OTUD6A	Q7L8S5	288 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	FBXO18	Q8NFZ0	1043 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	MICAL1	Q8TDZ2	1067 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	PSPC1	Q8WXF1	523 aa	Known RBP	18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	DYDC2	Q96IM9	177 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	C8orf76	Q96K31	380 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	FOXP1	Q9H334	677 aa	Predicted RBP	18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	AGPAT5	Q9NUQ2	364 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	ARID2	Q68CP9	1835 aa		18.78	■□□□□ 0.6
MATR3-222	ENST00000513678	FAM86C2P	A6NEL3	165 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	PER2	O15055	1255 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	DCX	O43602	365 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	ZNF623	O75123	536 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	SLITRK3	O94933	977 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	RAB27A	P51159	221 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	RBM10	P98175	930 aa	Known RBP	18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	EMC2	Q15006	297 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	RABEP1	Q15276	862 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	TWF2	Q6IBS0	349 aa	Known RBP	18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	TMEM184A	Q6ZMB5	413 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	CATSPER4	Q7RTX7	472 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	PRPF31	Q8WWY3	499 aa	Known RBP	18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	TMEM143	Q96AN5	459 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	TCF25	Q9BQ70	676 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	NGRN	Q9NPE2	291 aa	Known RBP	18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	XPNPEP1	Q9NQW7	623 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	FAM105A	Q9NUU6	356 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	SPG21	Q9NZD8	308 aa		18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	PUF60	Q9UHX1	559 aa	Known RBP	18.77	■□□□□ 0.6
MATR3-222	ENST00000513678	SKI	P12755	728 aa		18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	CYP4A11	Q02928	519 aa		18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	CTTN	Q14247	550 aa	Known RBP	18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	PLPP4	Q5VZY2	271 aa		18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	SRGAP1	Q7Z6B7	1085 aa		18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	LPP	Q93052	612 aa		18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	TTC12	Q9H892	705 aa	Predicted RBP	18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	MINDY3	Q9H8M7	445 aa		18.76	■□□□□ 0.59
MATR3-222	ENST00000513678	MEIS3P2	A8K0S8	358 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	HIDE1	A8MVS5	230 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	PRR33	A8MZF0	331 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	ZBTB39	O15060	712 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	TRAPPC10	P48553	1259 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	LAMTOR4	Q0VGL1	99 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	XKR9	Q5GH70	373 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	FERMT3	Q86UX7	667 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	TCP11	Q8WWU5	503 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	SUSD6	Q92537	303 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	ENTPD7	Q9NQZ7	604 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	ANKEF1	Q9NU02	776 aa		18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	USP15	Q9Y4E8	981 aa	Predicted RBP	18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	ARIH1	Q9Y4X5	557 aa	Predicted RBP	18.75	■□□□□ 0.59
MATR3-222	ENST00000513678	ASAP2	O43150	1006 aa		18.74	■□□□□ 0.59
MATR3-222	ENST00000513678	XRCC6	P12956	609 aa	Known RBP eCLIP	18.74	■□□□□ 0.59	9e-7	■□□□□ 8.5
MATR3-222	ENST00000513678	HOXA11	P31270	313 aa	Predicted RBP	18.74	■□□□□ 0.59
MATR3-222	ENST00000513678	BCAR1	P56945	870 aa		18.74	■□□□□ 0.59
MATR3-222	ENST00000513678	KRT17	Q04695	432 aa		18.74	■□□□□ 0.59
MATR3-222	ENST00000513678	GLB1L	Q6UWU2	654 aa		18.74	■□□□□ 0.59
MATR3-222	ENST00000513678	TMEM173	Q86WV6	379 aa	Predicted RBP	18.74	■□□□□ 0.59
MATR3-222	ENST00000513678	TMEM60	Q9H2L4	133 aa		18.74	■□□□□ 0.59
MATR3-222	ENST00000513678	TBC1D13	Q9NVG8	400 aa		18.74	■□□□□ 0.59
MATR3-222	ENST00000513678	CARNS1	A5YM72	827 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	SRGAP2C	P0DJJ0	459 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	TXK	P42681	527 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	ALDH7A1	P49419	539 aa	Known RBP	18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	FOSB	P53539	338 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	GUCY1B3	Q02153	619 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	POU5F1B	Q06416	359 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	CBX2	Q14781	532 aa	Predicted RBP	18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	HERC4	Q5GLZ8	1057 aa	Predicted RBP	18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	NOMO2	Q5JPE7	1267 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	UBXN11	Q5T124	520 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	AGMO	Q6ZNB7	445 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	MRPL10	Q7Z7H8	261 aa	Known RBP	18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	NOSTRIN	Q8IVI9	506 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	TPH2	Q8IWU9	490 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	FAM184A	Q8NB25	1140 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	RNF149	Q8NC42	400 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	MTR	Q99707	1265 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	PCDHB2	Q9Y5E7	798 aa		18.73	■□□□□ 0.59
MATR3-222	ENST00000513678	PIEZO1	Q92508	2521 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	C2orf71	A6NGG8	1288 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	LOC730098	B7Z3J9	87 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	NT5C1B-RDH14	C9J2C7	533 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	ST18	O60284	1047 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	B4GALT3	O60512	393 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	OFD1	O75665	1012 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	DGAT1	O75907	488 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	U2AF2	P26368	475 aa	Known RBP eCLIP	18.72	■□□□□ 0.59	2e-11	■■■■□ 22.5

Retrieved 100 of 20,778 RNA–protein pairs in 618 ms