RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 IQUBQ8NA54 791 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 TMEM87AQ8NBN3 555 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 KIAA1524Q8TCG1 905 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 BSNDQ8WZ55 320 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 A0A1W2PQ27 194 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 A0A1W2PQ64 194 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 A0A1W2PQD8 194 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 RPS6KA5O75582 802 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 PAK2Q13177 524 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 TMEM240Q5SV17 173 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 DYMQ7RTS9 669 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 ZNF410Q86VK4 478 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 REEP2Q9BRK0 252 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 GCOM2Q9BZD3 368 aaPredicted RBP18.2■□□□□ 0.5
HMGCL-209ENST00000513148 USP25Q9UHP3 1055 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 ASAP2O43150 1006 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 FGBP02675 491 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 PFKMP08237 780 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 DARSP14868 501 aaKnown RBP18.2■□□□□ 0.5
HMGCL-209ENST00000513148 EIF4BP23588 611 aaKnown RBP18.2■□□□□ 0.5
HMGCL-209ENST00000513148 GUCY2CP25092 1073 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 TFDP1Q14186 410 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 PLEKHG4Q58EX7 1191 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 PSRC1Q6PGN9 363 aaPredicted RBP18.2■□□□□ 0.5
HMGCL-209ENST00000513148 DAW1Q8N136 415 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 RNF214Q8ND24 703 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 KIFAP3Q92845 792 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 DRC1Q96MC2 740 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 IFT122Q9HBG6 1241 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 KCND2Q9NZV8 630 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 PADI3Q9ULW8 664 aa18.2■□□□□ 0.5
HMGCL-209ENST00000513148 CCDC66A2RUB6 948 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 ZBBXA8MT70 800 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 SYKP43405 635 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 CDC42EP1Q00587 391 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 MAPK7Q13164 816 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 SHHQ15465 462 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 CNKSR3Q6P9H4 555 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 FAM228AQ86W67 206 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 SEPT8Q92599 483 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 KIFC3Q9BVG8 833 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 ZHX3Q9H4I2 956 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 HPSEQ9Y251 543 aa18.19■□□□□ 0.5
HMGCL-209ENST00000513148 MYMKA6NI61 221 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 USP38Q8NB14 1042 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 DDX12PQ92771 950 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 IFT74Q96LB3 600 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 MINDY3Q9H8M7 445 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 SERTAD1Q9UHV2 236 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 GADD45BO75293 160 aaPredicted RBP18.18■□□□□ 0.5
HMGCL-209ENST00000513148 ACTN1P12814 892 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 PHKA2P46019 1235 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 PEX3P56589 373 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 GIT2Q14161 759 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 CEP57L1Q8IYX8 460 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 TIPINQ9BVW5 301 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 CUEDC2Q9H467 287 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 ST3GAL5Q9UNP4 418 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 SQORQ9Y6N5 450 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 LAMA3Q16787 3333 aa18.18■□□□□ 0.5
HMGCL-209ENST00000513148 MICAL3Q7RTP6 2002 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 CCDC169A6NNP5 214 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 INO80B-WBP1J3KQ70 363 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 TBCAO75347 108 aaKnown RBP18.17■□□□□ 0.5
HMGCL-209ENST00000513148 ADCY5O95622 1261 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 LIG1P18858 919 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 AFMP43652 599 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-209ENST00000513148 GRAMD1CQ8IYS0 662 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 DEPTORQ8TB45 409 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 RNPC3Q96LT9 517 aaKnown RBP18.17■□□□□ 0.5
HMGCL-209ENST00000513148 INO80BQ9C086 356 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-209ENST00000513148 TNMDQ9H2S6 317 aa18.17■□□□□ 0.5
HMGCL-209ENST00000513148 CXXC1Q9P0U4 656 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-209ENST00000513148 COLQQ9Y215 455 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-209ENST00000513148 GPR182O15218 404 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 FAM13AO94988 1023 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 BMP8BP34820 402 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 NAMPTP43490 491 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 PTENP60484 403 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 IKBKEQ14164 716 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 PPP2R5AQ15172 486 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 LONRF3Q496Y0 759 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 CCDC183Q5T5S1 534 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 APBB2Q92870 758 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 PYM1Q9BRP8 204 aaKnown RBP18.16■□□□□ 0.5
HMGCL-209ENST00000513148 ERVK-5Q9HDB9 667 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 ODF2LQ9ULJ1 636 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 ACTN4O43707 911 aaKnown RBP18.16■□□□□ 0.5
HMGCL-209ENST00000513148 IDEP14735 1019 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 IBSPP21815 317 aaPredicted RBP18.16■□□□□ 0.5
HMGCL-209ENST00000513148 SFPQP23246 707 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMGCL-209ENST00000513148 CASP1P29466 404 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 NPTX2P47972 431 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 CATSPER4Q7RTX7 472 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 TDHQ8IZJ6 230 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 KBTBD4Q9NVX7 518 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
HMGCL-209ENST00000513148 ADGRA3Q8IWK6 1321 aa18.16■□□□□ 0.5
HMGCL-209ENST00000513148 FAM237AA0A1B0GTK4 181 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms