RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 PBX3P40426 434 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 RARRES1P49788 294 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 RNASELQ05823 741 aaKnown RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 PTGDRQ13258 359 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 MXD4Q14582 209 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 LARP1BQ659C4 914 aaKnown RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 GLB1LQ6UWU2 654 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 FAM43BQ6ZT52 329 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 SRGAP1Q7Z6B7 1085 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 RBM23Q86U06 439 aaKnown RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 FERMT3Q86UX7 667 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 CRIPAKQ8N1N5 446 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 PIP4P2Q8N4L2 257 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 COLGALT1Q8NBJ5 622 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 SNX29Q8TEQ0 813 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 POF1BQ8WVV4 589 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 PPP2R3CQ969Q6 453 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 NACC1Q96RE7 527 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 PLVAPQ9BX97 442 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 TMEM117Q9H0C3 514 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 GBP3Q9H0R5 595 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 LMAN2LQ9H0V9 348 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 ELAC1Q9H777 363 aaKnown RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 UBE2ZQ9H832 354 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 IFT122Q9HBG6 1241 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 GPRC5CQ9NQ84 441 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 CHST12Q9NRB3 414 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 ANKEF1Q9NU02 776 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 AGPAT5Q9NUQ2 364 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 CLDND1Q9NY35 253 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 PLAGL2Q9UPG8 496 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 KIAA1671Q9BY89 1806 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 A0A0U1RQF3 1178 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 PP2D1A8MPX8 630 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 ASAP2O43150 1006 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 ZC3H11AO75152 810 aaKnown RBP eCLIP7.22□□□□□ -1.25
KDM3B-208ENST00000512928 FGF18O76093 207 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 LYPLA2O95372 231 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 EOMESO95936 686 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 LINC00271P0C7V0 271 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 SPATA31C1P0DKV0 1188 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 SKIP12755 728 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 DNAJB1P25685 340 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 TOB1P50616 345 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-208ENST00000512928 FXR2P51116 673 aaKnown RBP eCLIP7.22□□□□□ -1.255e-7■■■□□ 17.5
KDM3B-208ENST00000512928 RAB27AP51159 221 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 FAM189BP81408 668 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 CAPSQ13938 189 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 CLUL1Q15846 466 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 NAALADL2Q58DX5 795 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 RILPL1Q5EBL4 403 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 CLLU1OSQ5K130 101 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 KRT79Q5XKE5 535 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 PADI6Q6TGC4 694 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 URGCPQ8TCY9 931 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 ASAP3Q8TDY4 903 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 P2RX5Q93086 422 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 PGBD4Q96DM1 585 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 INTS4Q96HW7 963 aaKnown RBP7.22□□□□□ -1.25
KDM3B-208ENST00000512928 CPB2Q96IY4 423 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 ZNF558Q96NG5 402 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 CASD1Q96PB1 797 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 LRFN3Q9BTN0 628 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 POLR3CQ9BUI4 534 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-208ENST00000512928 APOL6Q9BWW8 343 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 MRPL9Q9BYD2 267 aaKnown RBP7.22□□□□□ -1.25
KDM3B-208ENST00000512928 TRIM6Q9C030 488 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-208ENST00000512928 MINDY3Q9H8M7 445 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 XPNPEP1Q9NQW7 623 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 ENTPD7Q9NQZ7 604 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 FAM105AQ9NUU6 356 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 DDX19AQ9NUU7 478 aaKnown RBP7.22□□□□□ -1.25
KDM3B-208ENST00000512928 KIAA1024Q9UPX6 916 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 PCDHB2Q9Y5E7 798 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 PCDHGC5Q9Y5F6 944 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 TTC3P53804 2025 aa7.22□□□□□ -1.25
KDM3B-208ENST00000512928 BRWD1Q9NSI6 2320 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 VWA3AA6NCI4 1184 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 MEIS3P2A8K0S8 358 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 NT5C1B-RDH14C9J2C7 533 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 LAD1O00515 517 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 TSPAN1O60635 241 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 SSBP05455 408 aaKnown RBP eCLIP7.21□□□□□ -1.26
KDM3B-208ENST00000512928 ATF7P17544 494 aaPredicted RBP7.21□□□□□ -1.26
KDM3B-208ENST00000512928 GLRA2P23416 452 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 RPA1P27694 616 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 CDC25AP30304 524 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
KDM3B-208ENST00000512928 IRS1P35568 1242 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 PPM1AP35813 382 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 ARL2P36404 184 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 NRIP1P48552 1158 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 ALDH7A1P49419 539 aaKnown RBP7.21□□□□□ -1.26
KDM3B-208ENST00000512928 NDUFV1P49821 464 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 PTENP60484 403 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 KRT17Q04695 432 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 MBTD1Q05BQ5 628 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 CSPP1Q1MSJ5 1256 aa7.21□□□□□ -1.26
KDM3B-208ENST00000512928 PLPP4Q5VZY2 271 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms