RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 KRT27Q7Z3Y8 459 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 FAM213AQ9BRX8 229 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 C2orf40Q9H1Z8 148 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 POTEFA5A3E0 1075 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 SOX5P35711 763 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 POTEGQ6S5H5 508 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 FAM47EQ6ZV65 393 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 RYBPQ8N488 228 aaPredicted RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 SNF8Q96H20 258 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 GCOM2Q9BZD3 368 aaPredicted RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 VIPAS39Q9H9C1 493 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 HDAC6Q9UBN7 1215 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 USP31Q70CQ4 1352 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 HAUS5O94927 633 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 ATP1A1P05023 1023 aaKnown RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 AP3M2P53677 418 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 GPR162Q16538 588 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 STOX1Q6ZVD7 989 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 TRIM59Q8IWR1 403 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 CNPY4Q8N129 248 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 LRRC43Q8N309 656 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 TTLL6Q8N841 843 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 GPR101Q96P66 508 aaPredicted RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 LRRC37BQ96QE4 947 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 MRPL46Q9H2W6 279 aaKnown RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 KLHL8Q9P2G9 620 aaPredicted RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 G3BP2Q9UN86 482 aaKnown RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 EPHB1P54762 984 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 PSMC5P62195 406 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 ACAD11Q709F0 780 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 ADGRF4Q8IZF3 695 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 CELF1Q92879 486 aaKnown RBP13.3□□□□□ -0.28
COL11A1-210ENST00000512756 CHMP6Q96FZ7 201 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 PLA2G12BQ9BX93 195 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 SUN2Q9UH99 717 aa13.3□□□□□ -0.28
COL11A1-210ENST00000512756 SNAP23O00161 211 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 FOXN1O15353 648 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 SLC26A4O43511 780 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 ZNF394Q53GI3 561 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 GSPT2Q8IYD1 628 aaKnown RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 XAB2Q9HCS7 855 aaKnown RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 UBN1Q9NPG3 1134 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 SNX12Q9UMY4 172 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 PP2D1A8MPX8 630 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 TAP1Q03518 808 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 SLC12A1Q13621 1099 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 CXorf38Q8TB03 319 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 MTRQ99707 1265 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 SSU72P8A0A1W2PR75 194 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 ESYT3A0FGR9 886 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 F5H6K3 240 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 SLC16A3O15427 465 aaKnown RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 ZNF189O75820 626 aaPredicted RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 SDC4P31431 198 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 GPC3P51654 580 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 KLRC3Q07444 240 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 ZNF211Q13398 564 aaPredicted RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 E2F4Q16254 413 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 ATP11CQ8NB49 1132 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 FBXL13Q8NEE6 735 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 DACT3Q96B18 629 aaPredicted RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
COL11A1-210ENST00000512756 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 WDR70Q9NW82 654 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 TRIM33Q9UPN9 1127 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 EYA4O95677 639 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 MARK3P27448 753 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 POLE2P56282 527 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 ZBTB17Q13105 803 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 EPHA7Q15375 998 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 ANKRD40Q6AI12 368 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 STAG2Q8N3U4 1231 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 WDR24Q96S15 920 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 GLI2P10070 1586 aa13.29□□□□□ -0.28
COL11A1-210ENST00000512756 TDP2O95551 362 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 EEF1B2P24534 225 aaKnown RBP13.28□□□□□ -0.28
COL11A1-210ENST00000512756 GNA15P30679 374 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 Q3C1V9 767 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 TEDDM1Q5T9Z0 273 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 ATG9AQ7Z3C6 839 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 TRIML2Q8N7C3 387 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
COL11A1-210ENST00000512756 SENP1Q9P0U3 644 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 INTUQ9ULD6 942 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 ZNF568Q3ZCX4 644 aa13.28□□□□□ -0.28
COL11A1-210ENST00000512756 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms