RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 ZC3H11AO75152 810 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 HOXB8P17481 243 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 TECP42680 631 aa16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 AK2P54819 239 aa16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 EARS2Q5JPH6 523 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 SLFN12Q8IYM2 578 aa16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 MRPL43Q8N983 215 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 EDAQ92838 391 aa16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 S1PR5Q9H228 398 aa16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 BRMS1Q9HCU9 246 aa16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 AGPAT5Q9NUQ2 364 aa16.45■□□□□ 0.22
CCHCR1-229ENST00000512418 DTNBO60941 627 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 YWHABP31946 246 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 KRT2P35908 639 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 SPIRE1Q08AE8 756 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 NCAPH2Q6IBW4 605 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 LLGL2Q6P1M3 1020 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 SYCE2Q6PIF2 218 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 HFE2Q6ZVN8 426 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 OTUD6AQ7L8S5 288 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 SRGAP1Q7Z6B7 1085 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 ZNF579Q8NAF0 562 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 PRPF31Q8WWY3 499 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 CASP10Q92851 521 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 LPPQ93052 612 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 PGBD4Q96DM1 585 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 RPGRIP1Q96KN7 1286 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 KCNH6Q9H252 994 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 ZSWIM4Q9H7M6 989 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 TBC1D13Q9NVG8 400 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 HCFC2Q9Y5Z7 792 aa16.44■□□□□ 0.22
CCHCR1-229ENST00000512418 C2orf71A6NGG8 1288 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 NT5C1B-RDH14C9J2C7 533 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 BAG4O95429 457 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 NR5A1Q13285 461 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 LONRF3Q496Y0 759 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 NOMO2Q5JPE7 1267 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 TCP11Q8WWU5 503 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 TNFRSF25Q93038 417 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 TMEM143Q96AN5 459 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 DYDC2Q96IM9 177 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 MFSD14AQ96MC6 490 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 RGL1Q9NZL6 768 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 INPP5FQ9Y2H2 1132 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 TECTAO75443 2155 aa16.43■□□□□ 0.22
CCHCR1-229ENST00000512418 ARID2Q68CP9 1835 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 FAM205CA6NFA0 338 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 ASAP2O43150 1006 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 OFD1O75665 1012 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 SRGAP2CP0DJJ0 459 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 CA8P35219 290 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 CYP4A11Q02928 519 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 RNASELQ05823 741 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 LAMTOR4Q0VGL1 99 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 EMC2Q15006 297 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 ME3Q16798 604 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 FERMT3Q86UX7 667 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 TMEM173Q86WV6 379 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 VPS52Q8N1B4 723 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 NECAB1Q8N987 351 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 IGSF21Q96ID5 467 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 ZBP1Q9H171 429 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 NRDE2Q9H7Z3 1164 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 BMP2KQ9NSY1 1161 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 PCDHB2Q9Y5E7 798 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 WDFY4Q6ZS81 3184 aa16.42■□□□□ 0.22
CCHCR1-229ENST00000512418 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 CLASP2O75122 1294 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 LARGE1O95461 756 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 GALTP07902 379 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 ZXDAP98168 799 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 ITIH3Q06033 890 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 GIT2Q14161 759 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 CTTNQ14247 550 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 PCBP1Q15365 356 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 XKR9Q5GH70 373 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 TRIM67Q6ZTA4 783 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 BMP8AQ7Z5Y6 402 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 DDX53Q86TM3 631 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 RNF149Q8NC42 400 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 NSUN7Q8NE18 718 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 URGCPQ8TCY9 931 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 MTRQ99707 1265 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 APOL5Q9BWW9 433 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 MINDY3Q9H8M7 445 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 PCDHA12Q9UN75 941 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 IRAK3Q9Y616 596 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 ZNF318Q5VUA4 2279 aa16.41■□□□□ 0.22
CCHCR1-229ENST00000512418 EIF5BO60841 1220 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-229ENST00000512418 ERLIN2O94905 339 aa16.4■□□□□ 0.22
CCHCR1-229ENST00000512418 SLITRK3O94933 977 aa16.4■□□□□ 0.22
CCHCR1-229ENST00000512418 CXCL14O95715 111 aa16.4■□□□□ 0.22
CCHCR1-229ENST00000512418 CTSAP10619 480 aa16.4■□□□□ 0.22
CCHCR1-229ENST00000512418 HOXA11P31270 313 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms